RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 ZNF644Q9H582 1327 aaPredicted RBP4.24□□□□□ -1.73
PTPRK-215ENST00000498284 OR2A25A4D2G3 310 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 CTAGE9A4FU28 777 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 ANKRD66B4E2M5 251 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 C16orf97H3BN30 126 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 BUD23O43709 281 aaKnown RBP4.24□□□□□ -1.73
PTPRK-215ENST00000498284 ERAL1O75616 437 aaKnown RBP4.24□□□□□ -1.73
PTPRK-215ENST00000498284 RSL1D1O76021 490 aaKnown RBP4.24□□□□□ -1.73
PTPRK-215ENST00000498284 PGM3O95394 542 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 CTAGE8P0CG41 777 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 CETPP11597 493 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 PRLRP16471 622 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 GM2AP17900 193 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 NR2F2P24468 414 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 AHRP35869 848 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 FMO5P49326 533 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 TERF1P54274 439 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 PITX1P78337 314 aaPredicted RBP4.24□□□□□ -1.73
PTPRK-215ENST00000498284 ARL16Q0P5N6 197 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 ZRSR1Q15695 479 aaKnown RBP4.24□□□□□ -1.73
PTPRK-215ENST00000498284 NTRK2Q16620 822 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 RAB6CQ53S08 254 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 GPR139Q6DWJ6 353 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 KCTD8Q6ZWB6 473 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 BHLHA9Q7RTU4 235 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 NR2C2APQ86WQ0 139 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 GALNT13Q8IUC8 556 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 LINC00346Q8IVM7 164 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 CTAGE4Q8IX94 777 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 SCML4Q8N228 414 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 C1orf52Q8N6N3 182 aaKnown RBP4.24□□□□□ -1.73
PTPRK-215ENST00000498284 LSMEM1Q8N8F7 131 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 APPL2Q8NEU8 664 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 OR52I2Q8NH67 350 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 SNRNP27Q8WVK2 155 aaKnown RBP4.24□□□□□ -1.73
PTPRK-215ENST00000498284 LINGO1Q96FE5 620 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 CEP295NLQ96MC4 621 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 HGH1Q9BTY7 390 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 RAB6CQ9H0N0 254 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 ARHGEF38Q9NXL2 777 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 MARCH4Q9P2E8 410 aaPredicted RBP4.24□□□□□ -1.73
PTPRK-215ENST00000498284 CPSF2Q9P2I0 782 aaKnown RBP4.24□□□□□ -1.73
PTPRK-215ENST00000498284 ICAM5Q9UMF0 924 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 PCDHGA5Q9Y5G8 931 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 KAT6BQ8WYB5 2073 aa4.24□□□□□ -1.73
PTPRK-215ENST00000498284 SYNDIG1LA6NDD5 238 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 CAPN9O14815 690 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 WISP2O76076 250 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 ZNF23P17027 643 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 NMBRP28336 390 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 LMAN1P49257 510 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 PNLIPRP2P54317 469 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 TMF1P82094 1093 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 ACCSLQ4AC99 568 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 IGSF11Q5DX21 431 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 GDPD4Q6W3E5 623 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 ZNF852Q6ZMS4 543 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 AACSQ86V21 672 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 KBTBD6Q86V97 674 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 GBGT1Q8N5D6 347 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 METTL27Q8N6F8 245 aaPredicted RBP4.23□□□□□ -1.73
PTPRK-215ENST00000498284 RDM1Q8NG50 284 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 SLC22A18Q96BI1 424 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 PAFAH2Q99487 392 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 APOL6Q9BWW8 343 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 SEMA6AQ9H2E6 1030 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 GIMAP4Q9NUV9 329 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 WSB2Q9NYS7 404 aaPredicted RBP4.23□□□□□ -1.73
PTPRK-215ENST00000498284 PLAGL1Q9UM63 463 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 YIPF1Q9Y548 306 aa4.23□□□□□ -1.73
PTPRK-215ENST00000498284 MAGED1Q9Y5V3 778 aaPredicted RBP4.23□□□□□ -1.73
PTPRK-215ENST00000498284 LNP1A1A4G5 178 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 OR2M5A3KFT3 312 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 C15orf62A8K5M9 175 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 BMPR1BO00238 502 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 PLK4O00444 970 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 SH2B2O14492 632 aaPredicted RBP4.22□□□□□ -1.73
PTPRK-215ENST00000498284 NDUFS4O43181 175 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 XPNPEP2O43895 674 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 PLOD3O60568 738 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 BMP10O95393 424 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 CRYAAP02489 173 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 DNTTP04053 509 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 ATP1A1P05023 1023 aaKnown RBP4.22□□□□□ -1.73
PTPRK-215ENST00000498284 STAT2P52630 851 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 MLLT10P55197 1068 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 RPL24P83731 157 aaKnown RBP4.22□□□□□ -1.73
PTPRK-215ENST00000498284 CXCL9Q07325 125 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 GAGE2BQ13066 116 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 GAGE5Q13069 117 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 GAGE6Q13070 117 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 PRPF4BQ13523 1007 aaKnown RBP4.22□□□□□ -1.73
PTPRK-215ENST00000498284 PCLAFQ15004 111 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 GAGE2EQ4V326 116 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 PDSS1Q5T2R2 415 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 GAGE2AQ6NT46 116 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 RBM15BQ8NDT2 890 aaKnown RBP4.22□□□□□ -1.73
PTPRK-215ENST00000498284 DMBX1Q8NFW5 382 aa4.22□□□□□ -1.73
PTPRK-215ENST00000498284 OXNAD1Q96HP4 312 aaPredicted RBP4.22□□□□□ -1.73
PTPRK-215ENST00000498284 ZNF583Q96ND8 569 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms