RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 PTPRN2Q92932 1015 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 ELSPBP1Q96BH3 223 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 LRRC39Q96DD0 335 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 PEX11GQ96HA9 241 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 ELMO2Q96JJ3 720 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 SERAC1Q96JX3 654 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 MSLNLQ96KJ4 702 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 MRGPRX3Q96LB0 322 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 TBATAQ96M53 351 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 TRIB3Q96RU7 358 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 SMC6Q96SB8 1091 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 NDNQ99608 321 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 SPATA25Q9BR10 227 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 BDH2Q9BUT1 245 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 TMEM109Q9BVC6 243 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 KIFC1Q9BW19 673 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 TDRD1Q9BXT4 1180 aaKnown RBP4.75□□□□□ -1.65
CMSS1-209ENST00000497345 SLC2A11Q9BYW1 496 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 SLC13A1Q9BZW2 595 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 ABCG8Q9H221 673 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 VPS11Q9H270 941 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 ATP13A3Q9H7F0 1226 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 FBRSL1Q9HCM7 1045 aaKnown RBP4.75□□□□□ -1.65
CMSS1-209ENST00000497345 VPS45Q9NRW7 570 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 ELOVL2Q9NXB9 296 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 NKIRAS1Q9NYS0 192 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 MARCH4Q9P2E8 410 aaPredicted RBP4.75□□□□□ -1.65
CMSS1-209ENST00000497345 GULP1Q9UBP9 304 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 FBLN5Q9UBX5 448 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 CGGBP1Q9UFW8 167 aaPredicted RBP4.75□□□□□ -1.65
CMSS1-209ENST00000497345 SLC24A2Q9UI40 661 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 CD84Q9UIB8 345 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 SLC39A10Q9ULF5 831 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 SLC8A2Q9UPR5 921 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 CRYL1Q9Y2S2 319 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 MTO1Q9Y2Z2 717 aaKnown RBP4.75□□□□□ -1.65
CMSS1-209ENST00000497345 ZNF711Q9Y462 761 aa4.75□□□□□ -1.65
CMSS1-209ENST00000497345 ATG2BQ96BY7 2078 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 ANKRD36A6QL64 1941 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 TRBV23OR9-2A0A075B6M9 112 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 C1orf232A0A0U1RR37 186 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.74□□□□□ -1.65
CMSS1-209ENST00000497345 UBA6A0AVT1 1052 aaPredicted RBP4.74□□□□□ -1.65
CMSS1-209ENST00000497345 TMEM120BA0PK00 339 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 PRR23AA6NEV1 266 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 C2orf81A6NN90 581 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 ANKRD66B4E2M5 251 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 TPP1O14773 563 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 CD3EAPO15446 510 aaKnown RBP4.74□□□□□ -1.65
CMSS1-209ENST00000497345 PHGDHO43175 533 aaKnown RBP4.74□□□□□ -1.65
CMSS1-209ENST00000497345 HOXC11O43248 304 aaPredicted RBP4.74□□□□□ -1.65
CMSS1-209ENST00000497345 MBTPS2O43462 519 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 LDB2O43679 373 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 DNAJC6O75061 913 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 ECI2O75521 394 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 RPP40O75818 363 aaKnown RBP4.74□□□□□ -1.65
CMSS1-209ENST00000497345 KRT37O76014 449 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 KRT38O76015 456 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 USP1O94782 785 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 HAUS5O94927 633 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 POP4O95707 220 aaKnown RBP4.74□□□□□ -1.65
CMSS1-209ENST00000497345 CRTAMO95727 393 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 RECKO95980 971 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 TOP3BO95985 862 aaKnown RBP4.74□□□□□ -1.65
CMSS1-209ENST00000497345 GSRP00390 522 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 EGFP01133 1207 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 IL1BP01584 269 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 APODP05090 189 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 ADRB1P08588 477 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 SNRPAP09012 282 aaKnown RBP4.74□□□□□ -1.65
CMSS1-209ENST00000497345 GSTA2P09210 222 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 DLDP09622 509 aaKnown RBP4.74□□□□□ -1.65
CMSS1-209ENST00000497345 NEFHP12036 1026 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 ALADP13716 330 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 TCF3P15923 654 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 KRT4P19013 534 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 CR2P20023 1033 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 CD72P21854 359 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 LPOP22079 712 aaPredicted RBP4.74□□□□□ -1.65
CMSS1-209ENST00000497345 PRKCHP24723 683 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 MC4RP32245 332 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 RPA3P35244 121 aaPredicted RBP4.74□□□□□ -1.65
CMSS1-209ENST00000497345 IL12RB1P42701 662 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 SLC1A2P43004 574 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 RGS19P49795 217 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 CDKN1CP49918 316 aaPredicted RBP4.74□□□□□ -1.65
CMSS1-209ENST00000497345 IRF9Q00978 393 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 TFF2Q03403 129 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 RAD51Q06609 339 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 NSUN2Q08J23 767 aaKnown RBP eCLIP4.74□□□□□ -1.65
CMSS1-209ENST00000497345 HTR4Q13639 388 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 SEMA3AQ14563 771 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 ZNF234Q14588 700 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 GRM3Q14832 879 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 SPATS1Q496A3 300 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 FASTKD1Q53R41 847 aaKnown RBP4.74□□□□□ -1.65
CMSS1-209ENST00000497345 ZNF789Q5FWF6 425 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 RBM20Q5T481 1227 aaKnown RBP4.74□□□□□ -1.65
CMSS1-209ENST00000497345 TEDDM1Q5T9Z0 273 aa4.74□□□□□ -1.65
CMSS1-209ENST00000497345 LGSNQ5TDP6 509 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms