RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 SCHIP1Q9P0W5 487 aaPredicted RBP13.31□□□□□ -0.28
COL1A1-208ENST00000494334 WHRNQ9P202 907 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 UTP11Q9Y3A2 253 aaKnown RBP13.31□□□□□ -0.28
COL1A1-208ENST00000494334 SPTBN2O15020 2390 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 GOLGA4Q13439 2230 aaKnown RBP13.31□□□□□ -0.28
COL1A1-208ENST00000494334 C17orf113A0A1B0GUU1 675 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 OR5K4A6NMS3 321 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 PDZK1P1A8MUH7 402 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 NDC80O14777 642 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 CASC3O15234 703 aaKnown RBP13.3□□□□□ -0.28
COL1A1-208ENST00000494334 PPM1DO15297 605 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 OPA1O60313 960 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 BRAFP15056 766 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 PNLIPP16233 465 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 PGAM1P18669 254 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 PPARGP37231 505 aaPredicted RBP13.3□□□□□ -0.28
COL1A1-208ENST00000494334 DRG2P55039 364 aaKnown RBP13.3□□□□□ -0.28
COL1A1-208ENST00000494334 CLDN6P56747 220 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 INSM1Q01101 510 aaPredicted RBP13.3□□□□□ -0.28
COL1A1-208ENST00000494334 SMAD1Q15797 465 aaKnown RBP13.3□□□□□ -0.28
COL1A1-208ENST00000494334 SEPT7Q16181 437 aaKnown RBP13.3□□□□□ -0.28
COL1A1-208ENST00000494334 AARS2Q5JTZ9 985 aaKnown RBP13.3□□□□□ -0.28
COL1A1-208ENST00000494334 METRNLQ641Q3 311 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 ABRAXAS1Q6UWZ7 409 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 WASH2PQ6VEQ5 465 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 TMPRSS7Q7RTY8 843 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 MMGT1Q8N4V1 131 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 MNS1Q8NEH6 495 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 MAPK15Q8TD08 544 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 LRRC1Q9BTT6 524 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 RAB17Q9H0T7 212 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 WASH6PQ9NQA3 447 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 GRHL1Q9NZI5 618 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 WDR37Q9Y2I8 494 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 FAM169AQ9Y6X4 670 aa13.3□□□□□ -0.28
COL1A1-208ENST00000494334 ARHGEF17Q96PE2 2063 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-208ENST00000494334 KIR2DS5A0A0G2JLQ3 304 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 A0A0G2JNG1 304 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 CTAGE15A4D2H0 777 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 KLHL33A6NCF5 533 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 RHPN2P1A8MT19 583 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 KIR2DS3K7RE56 304 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 QSOX1O00391 747 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 POLBP06746 335 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 CTAGE8P0CG41 777 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 SLC2A4P14672 509 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 SPINK2P20155 84 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 ELK3P41970 407 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 FASLGP48023 281 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 TTPAP49638 278 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 ARL4CP56559 192 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 SLC7A5Q01650 507 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 CALCOCO2Q13137 446 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 KIR2DS5Q14953 304 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 CLCA4Q14CN2 919 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 TRADDQ15628 312 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 HIF1AQ16665 826 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 ZNF658BQ4V348 819 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-208ENST00000494334 HP1BP3Q5SSJ5 553 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-208ENST00000494334 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-208ENST00000494334 AGAP9Q5VTM2 703 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 MRNIPQ6NTE8 343 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 NEPROQ6NW34 567 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 C8orf74Q6P047 294 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 ZNF438Q7Z4V0 828 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 SDCCAG8Q86SQ7 713 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-208ENST00000494334 SLC9B2Q86UD5 537 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 CTAGE6Q86UF2 777 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 CTAGE4Q8IX94 777 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 CFAP206Q8IYR0 622 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 LILRA3Q8N6C8 439 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-208ENST00000494334 Q8N9G6 341 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-208ENST00000494334 GPR150Q8NGU9 434 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 WDR83Q9BRX9 315 aaKnown RBP13.29□□□□□ -0.28
COL1A1-208ENST00000494334 CCM2Q9BSQ5 444 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 SCNM1Q9BWG6 230 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 ABCG4Q9H172 646 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 SARS2Q9NP81 518 aaKnown RBP13.29□□□□□ -0.28
COL1A1-208ENST00000494334 ZNF624Q9P2J8 865 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-208ENST00000494334 FAM8A1Q9UBU6 413 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 TEX264Q9Y6I9 313 aa13.29□□□□□ -0.28
COL1A1-208ENST00000494334 A0A1W2PQM1 296 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 OR52A4PA6NMU1 304 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 E7ESA3 106 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 NTN3O00634 580 aaPredicted RBP13.28□□□□□ -0.28
COL1A1-208ENST00000494334 PRMT5O14744 637 aaPredicted RBP13.28□□□□□ -0.28
COL1A1-208ENST00000494334 B4GAT1O43505 415 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 NDUFS3O75489 264 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 TTC4O95801 387 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 OR56A5P0C7T3 313 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 XRCC1P18887 633 aaPredicted RBP13.28□□□□□ -0.28
COL1A1-208ENST00000494334 OGNP20774 298 aaKnown RBP13.28□□□□□ -0.28
COL1A1-208ENST00000494334 SLC19A1P41440 591 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 UBE2IP63279 158 aaKnown RBP13.28□□□□□ -0.28
COL1A1-208ENST00000494334 CCL7P80098 99 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 HHEXQ03014 270 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 CBLBQ13191 982 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 BIRC2Q13490 618 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 THOC5Q13769 683 aaKnown RBP13.28□□□□□ -0.28
COL1A1-208ENST00000494334 CRYMQ14894 314 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms