RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 FASTKD1Q53R41 847 aaKnown RBP11.42□□□□□ -0.58
CTSA-209ENST00000493522 FNBP1LQ5T0N5 605 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 C6orf132Q5T0Z8 1188 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 ARMC3Q5W041 872 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 KIAA0930Q6ICG6 404 aaPredicted RBP11.42□□□□□ -0.58
CTSA-209ENST00000493522 ZCCHC8Q6NZY4 707 aaKnown RBP11.42□□□□□ -0.58
CTSA-209ENST00000493522 PDIK1LQ8N165 341 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 CACTIN-AS1Q8N1I8 211 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 SDR16C5Q8N3Y7 309 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 RASGEF1AQ8N9B8 481 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 KYQ8NBH2 561 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 NOA1Q8NC60 698 aaKnown RBP11.42□□□□□ -0.58
CTSA-209ENST00000493522 OR4L1Q8NH43 312 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 NAT14Q8WUY8 206 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 SCG3Q8WXD2 468 aaKnown RBP11.42□□□□□ -0.58
CTSA-209ENST00000493522 FGF11Q92914 225 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 MFSD3Q96ES6 412 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 COPS8Q99627 209 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 TRIM56Q9BRZ2 755 aaKnown RBP11.42□□□□□ -0.58
CTSA-209ENST00000493522 OSGEPL1Q9H4B0 414 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 EVA1BQ9NVM1 165 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 ZDHHC3Q9NYG2 299 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 WHRNQ9P202 907 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 GPR34Q9UPC5 381 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 KCNK6Q9Y257 313 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 RPS6KL1Q9Y6S9 549 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 TEX51A0A1B0GUA7 166 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 AGAP14A8MT82 685 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 ESPNB1AK53 854 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 TPP1O14773 563 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 CHUKO15111 745 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 KMOO15229 486 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 BRINP1O60477 761 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 C1QL1O75973 258 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 VAPBO95292 243 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 PGAM1P18669 254 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 ACP1P24666 158 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 DEKP35659 375 aaKnown RBP11.41□□□□□ -0.58
CTSA-209ENST00000493522 CTSCP53634 463 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 SLC7A5Q01650 507 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 PROX2Q3B8N5 592 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 MSS51Q4VC12 460 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 AARS2Q5JTZ9 985 aaKnown RBP11.41□□□□□ -0.58
CTSA-209ENST00000493522 DUPD1Q68J44 220 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 TMEM220Q6QAJ8 160 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 GPR155Q7Z3F1 870 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 PIANPQ8IYJ0 282 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 AGGF1Q8N302 714 aaeCLIP11.41□□□□□ -0.58
CTSA-209ENST00000493522 MMGT1Q8N4V1 131 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 FAM46DQ8NEK8 389 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 GPBAR1Q8TDU6 330 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 HEXDCQ8WVB3 486 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 GLMNQ92990 594 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 CCDC97Q96F63 343 aaPredicted RBP11.41□□□□□ -0.58
CTSA-209ENST00000493522 CFAP36Q96G28 342 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 SIGLEC10Q96LC7 697 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 APOLD1Q96LR9 279 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 PWWP2AQ96N64 755 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 TTC1Q99614 292 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 TIMM29Q9BSF4 260 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 LRRC1Q9BTT6 524 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 CARD6Q9BX69 1037 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 DPEP2Q9H4A9 486 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 TAAR2Q9P1P5 351 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 GULP1Q9UBP9 304 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 FAM8A1Q9UBU6 413 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 CHMP2BQ9UQN3 213 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 DNAJC16Q9Y2G8 782 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 ZNF462Q96JM2 2506 aa11.41□□□□□ -0.58
CTSA-209ENST00000493522 ESYT3A0FGR9 886 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 MAGEB16A2A368 324 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 GOLGA8KD6RF30 607 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 GOLGA8TH3BQL2 631 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 CD3EAPO15446 510 aaKnown RBP11.4□□□□□ -0.58
CTSA-209ENST00000493522 ZNF500O60304 480 aaPredicted RBP11.4□□□□□ -0.58
CTSA-209ENST00000493522 SNX2O60749 519 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 USP1O94782 785 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 ZIC2O95409 532 aaPredicted RBP11.4□□□□□ -0.58
CTSA-209ENST00000493522 POLBP06746 335 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 MYF5P13349 255 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 ZNF7P17097 686 aaPredicted RBP11.4□□□□□ -0.58
CTSA-209ENST00000493522 VCLP18206 1134 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 B4GALNT1Q00973 533 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 E2F1Q01094 437 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 INSM1Q01101 510 aaPredicted RBP11.4□□□□□ -0.58
CTSA-209ENST00000493522 PDIA2Q13087 525 aaKnown RBP11.4□□□□□ -0.58
CTSA-209ENST00000493522 SEMA3AQ14563 771 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 ITIH4Q14624 930 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 CRYMQ14894 314 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 TBC1D25Q3MII6 688 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 ANKRD20A4Q4UJ75 823 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 HP1BP3Q5SSJ5 553 aaPredicted RBP11.4□□□□□ -0.58
CTSA-209ENST00000493522 LYPLAL1Q5VWZ2 237 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 LVRNQ6Q4G3 990 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 LDB1Q86U70 411 aaPredicted RBP11.4□□□□□ -0.58
CTSA-209ENST00000493522 NRROSQ86YC3 692 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 ZNF547Q8IVP9 402 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 SLC35F3Q8IY50 421 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 BEND7Q8N7W2 519 aaPredicted RBP11.4□□□□□ -0.58
CTSA-209ENST00000493522 DCBLD1Q8N8Z6 715 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms