RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 LLGL1Q15334 1064 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 TAF1AQ15573 450 aaPredicted RBP8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 RPE65Q16518 533 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 INSCQ1MX18 579 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 ODF2Q5BJF6 829 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 SNAP47Q5SQN1 464 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 KAZNQ674X7 775 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 KCTD11Q693B1 232 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 DENND5AQ6IQ26 1287 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 BORAQ6PGQ7 559 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 BPHLQ86WA6 291 aaPredicted RBP8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 TMTC1Q8IUR5 882 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 ESX1Q8N693 406 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 ACTL9Q8TC94 416 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 ZNF398Q8TD17 642 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 RSC1A1Q92681 617 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 ALG3Q92685 438 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 MRFAP1L1Q96HT8 127 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 CTRCQ99895 268 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 ANP32EQ9BTT0 268 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 SLC25A18Q9H1K4 315 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 OSGEPL1Q9H4B0 414 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 KLHL8Q9P2G9 620 aaPredicted RBP8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 IL17BQ9UHF5 180 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 DNAJC16Q9Y2G8 782 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 PCDHGA6Q9Y5G7 932 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 DUSP10Q9Y6W6 482 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 IGLV3-16A0A075B6K0 115 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 CCDC66A2RUB6 948 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 MGAT4DA6NG13 374 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 GPR39O43194 453 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 KIF1CO43896 1103 aaKnown RBP8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 NDUFA10O95299 355 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 WISP1O95388 367 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 PYGMP11217 842 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 ZNF28P17035 718 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 TYRP1P17643 537 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 AMD1P17707 334 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 LPOP22079 712 aaPredicted RBP8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 F8A1P23610 371 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 CSRP3P50461 194 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 DRG2P55039 364 aaKnown RBP8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 GEMP55040 296 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 SH3BP2P78314 561 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 CDC20Q12834 499 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 NFATC3Q12968 1075 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 LAMB3Q13751 1172 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 PTPRCAPQ14761 206 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 SPA17Q15506 151 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 PLA2G4EQ3MJ16 856 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 BCL7AQ4VC05 210 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 ANKRD20A2Q5SQ80 823 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 ANKRD20A1Q5TYW2 823 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 ANKRD20A3Q5VUR7 823 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 CAPRIN2Q6IMN6 1127 aaKnown RBP8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 TMEM220Q6QAJ8 160 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 FAM151BQ6UXP7 276 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 ZNF517Q6ZMY9 492 aaPredicted RBP8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 GLT6D1Q7Z4J2 308 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 DAAM2Q86T65 1068 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 KMT5CQ86Y97 462 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 TRAPPC5Q8IUR0 188 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 CARFQ8N187 725 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 SLC25A41Q8N5S1 370 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 IPMKQ8NFU5 416 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 OR2L2Q8NH16 312 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 BLOC1S5Q8TDH9 187 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 UBXN4Q92575 508 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 ZDHHC12Q96GR4 267 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 SPATA13Q96N96 652 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 HEMGNQ9BXL5 484 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 OSBPL8Q9BZF1 889 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 TRIM5Q9C035 493 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 ZCCHC2Q9C0B9 1178 aaKnown RBP8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 TWSG1Q9GZX9 223 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 LACRTQ9GZZ8 138 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 C10orf88Q9H8K7 445 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 GPN2Q9H9Y4 310 aaPredicted RBP8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 RSPH14Q9UHP6 348 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 FEZ2Q9UHY8 353 aaPredicted RBP8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 ACSL5Q9ULC5 683 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 AAR2Q9Y312 384 aaKnown RBP8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 PKP3Q9Y446 797 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 KCTD3Q9Y597 815 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 ARL5AQ9Y689 179 aa8.2□□□□□ -1.1
SMARCB1-207ENST00000491967 HECTD1Q9ULT8 2610 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 NAV2Q8IVL1 2488 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 LRRK2Q5S007 2527 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 IGHV5-51A0A0C4DH38 117 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 TRBV5-4A0A0C4DH59 114 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 C17orf113A0A1B0GUU1 675 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 SOWAHDA6NJG2 315 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 C2orf81A6NN90 581 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 PDZK1P1A8MUH7 402 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 H7C0S8 307 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 STX7O15400 261 aaKnown RBP8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 LDB2O43679 373 aa8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 BUD23O43709 281 aaKnown RBP8.19□□□□□ -1.1
SMARCB1-207ENST00000491967 SLC28A2O43868 658 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms