RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 TTYH2Q9BSA4 534 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 MKRN2Q9H000 416 aaKnown RBP9.72□□□□□ -0.85
NOD1-208ENST00000489614 LMAN2LQ9H0V9 348 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 RPRD1BQ9NQG5 326 aaKnown RBP9.72□□□□□ -0.85
NOD1-208ENST00000489614 PAQR5Q9NXK6 330 aaPredicted RBP9.72□□□□□ -0.85
NOD1-208ENST00000489614 SLC24A2Q9UI40 661 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 PCDHGA10Q9Y5H3 936 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 EPOPA6NHQ4 379 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 COPEO14579 308 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 RAD51BO15315 384 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 ZNF254O75437 659 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 TP53P04637 393 aaPredicted RBP9.72□□□□□ -0.85
NOD1-208ENST00000489614 CCR2P41597 374 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 TRIM25Q14258 630 aaKnown RBP9.72□□□□□ -0.85
NOD1-208ENST00000489614 HECTD3Q5T447 861 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 TMEM184AQ6ZMB5 413 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 PCGF5Q86SE9 256 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 CAND1Q86VP6 1230 aaKnown RBP9.72□□□□□ -0.85
NOD1-208ENST00000489614 ARMC8Q8IUR7 673 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 LGI2Q8N0V4 545 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 FAM71DQ8N9W8 422 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 MCUQ8NE86 351 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 JPH3Q8WXH2 748 aaPredicted RBP9.72□□□□□ -0.85
NOD1-208ENST00000489614 PIK3R3Q92569 461 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 CMTM5Q96DZ9 223 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 CFAP36Q96G28 342 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 OR2B2Q9GZK3 357 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 FARSBQ9NSD9 589 aaKnown RBP9.72□□□□□ -0.85
NOD1-208ENST00000489614 AP3M1Q9Y2T2 418 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 CDH23Q9H251 3354 aa9.72□□□□□ -0.85
NOD1-208ENST00000489614 TRIM77I1YAP6 450 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 SH3BP5O60239 455 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 CD68P34810 354 aaPredicted RBP9.71□□□□□ -0.85
NOD1-208ENST00000489614 KRT20P35900 424 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 ATP5C1P36542 298 aaKnown RBP9.71□□□□□ -0.85
NOD1-208ENST00000489614 KCNQ1P51787 676 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 EPHB3P54753 998 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 EFEMP1Q12805 493 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 ALG1LQ6GMV1 187 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 CCDC149Q6ZUS6 474 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 SNX32Q86XE0 403 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 GALNT12Q8IXK2 581 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 HS6ST3Q8IZP7 471 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 KREMEN2Q8NCW0 462 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 VN1R2Q8NFZ6 395 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 HTR3CQ8WXA8 447 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 SLC22A12Q96S37 553 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 MTIF3Q9H2K0 278 aaKnown RBP9.71□□□□□ -0.85
NOD1-208ENST00000489614 NOL11Q9H8H0 719 aaKnown RBP9.71□□□□□ -0.85
NOD1-208ENST00000489614 ATP13A2Q9NQ11 1180 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 ACTR3BQ9P1U1 418 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 FETUBQ9UGM5 382 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 VPS4AQ9UN37 437 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 PMF1-BGLAPU3KQ54 211 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 PLXNB3Q9ULL4 1909 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 A0A0A0MRY4 1105 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 FAM155BO75949 473 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 METTL18O95568 372 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 CA3P07451 260 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 ENO3P13929 434 aaPredicted RBP9.71□□□□□ -0.85
NOD1-208ENST00000489614 CCNCP24863 283 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 PTPN3P26045 913 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 CASP3P42574 277 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 RHAGQ02094 409 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 DUSP6Q16828 381 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 FBXL22Q6P050 247 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 CCBE1Q6UXH8 406 aaPredicted RBP9.71□□□□□ -0.85
NOD1-208ENST00000489614 ZBTB49Q6ZSB9 765 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 CHSY1Q86X52 802 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 PPIL6Q8IXY8 311 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 TMEM102Q8N9M5 508 aaPredicted RBP9.71□□□□□ -0.85
NOD1-208ENST00000489614 ANKRD49Q8WVL7 239 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 ASIC4Q96FT7 647 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 TXNDC15Q96J42 360 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 SPATA13Q96N96 652 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 TM9SF2Q99805 663 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 BBS2Q9BXC9 721 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 PBX4Q9BYU1 374 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 PRDM12Q9H4Q4 367 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 PAK5Q9P286 719 aa9.71□□□□□ -0.85
NOD1-208ENST00000489614 DOCK8Q8NF50 2099 aa9.71□□□□□ -0.86
NOD1-208ENST00000489614 HTRA2O43464 458 aaPredicted RBP9.71□□□□□ -0.86
NOD1-208ENST00000489614 B4GAT1O43505 415 aa9.71□□□□□ -0.86
NOD1-208ENST00000489614 HNRNPA1P09651 372 aaKnown RBP eCLIP9.71□□□□□ -0.86
NOD1-208ENST00000489614 DHRS4L1P0CG22 281 aa9.71□□□□□ -0.86
NOD1-208ENST00000489614 DNAJB2P25686 324 aa9.71□□□□□ -0.86
NOD1-208ENST00000489614 ALFQ53S48 1182 aa9.71□□□□□ -0.86
NOD1-208ENST00000489614 CHST9Q7L1S5 443 aa9.71□□□□□ -0.86
NOD1-208ENST00000489614 PALM2Q8IXS6 379 aa9.71□□□□□ -0.86
NOD1-208ENST00000489614 POC5Q8NA72 575 aa9.71□□□□□ -0.86
NOD1-208ENST00000489614 KCTD4Q8WVF5 259 aa9.71□□□□□ -0.86
NOD1-208ENST00000489614 CYGBQ8WWM9 190 aa9.71□□□□□ -0.86
NOD1-208ENST00000489614 VOPP1Q96AW1 172 aa9.71□□□□□ -0.86
NOD1-208ENST00000489614 PPP1R36Q96LQ0 422 aa9.71□□□□□ -0.86
NOD1-208ENST00000489614 ZNF597Q96LX8 424 aa9.71□□□□□ -0.86
NOD1-208ENST00000489614 CSF3RQ99062 836 aa9.71□□□□□ -0.86
NOD1-208ENST00000489614 LGMNQ99538 433 aa9.71□□□□□ -0.86
NOD1-208ENST00000489614 DOK1Q99704 481 aa9.71□□□□□ -0.86
NOD1-208ENST00000489614 SLC39A8Q9C0K1 460 aa9.71□□□□□ -0.86
NOD1-208ENST00000489614 SYTL2Q9HCH5 934 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms