RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 HGFP14210 728 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 RPL10P27635 214 aaKnown RBP13.27□□□□□ -0.29
LMO4-203ENST00000489303 MC4RP32245 332 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 CSTF2P33240 577 aaKnown RBP eCLIP13.27□□□□□ -0.29
LMO4-203ENST00000489303 LIMK2P53671 638 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 MSLNQ13421 630 aaPredicted RBP13.27□□□□□ -0.29
LMO4-203ENST00000489303 LY6DQ14210 128 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 SKIDA1Q1XH10 827 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 ZRANB3Q5FWF4 1079 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 FNBP1LQ5T0N5 605 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 TMEM164Q5U3C3 297 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 AGAP9Q5VTM2 703 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 KIAA1614Q5VZ46 1190 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 TMEM71Q6P5X7 295 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 DRICH1Q6PGQ1 229 aaPredicted RBP13.27□□□□□ -0.29
LMO4-203ENST00000489303 ABRAXAS1Q6UWZ7 409 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 DET1Q7L5Y6 550 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 TAS2R42Q7RTR8 314 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 CLEC14AQ86T13 490 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 ZNF761Q86XN6 746 aaPredicted RBP13.27□□□□□ -0.29
LMO4-203ENST00000489303 RBM12BQ8IXT5 1001 aaKnown RBP13.27□□□□□ -0.29
LMO4-203ENST00000489303 STYXQ8WUJ0 223 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 NCSTNQ92542 709 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 DNAJC1Q96KC8 554 aaKnown RBP13.27□□□□□ -0.29
LMO4-203ENST00000489303 CCDC74BQ96LY2 380 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 COPS8Q99627 209 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 DPH1Q9BZG8 443 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 UCK1Q9HA47 277 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 RAB6BQ9NRW1 208 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 POT1Q9NUX5 634 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 JRKLQ9Y4A0 524 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 PCDHGA7Q9Y5G6 932 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 IGHV5-10-1A0A0J9YXX1 117 aa13.26□□□□□ -0.29
LMO4-203ENST00000489303 LILRA5A6NI73 299 aa13.26□□□□□ -0.29
LMO4-203ENST00000489303 CDRT15L2A8MXV6 281 aa13.26□□□□□ -0.29
LMO4-203ENST00000489303 TK2O00142 265 aa13.26□□□□□ -0.29
LMO4-203ENST00000489303 AMD1P17707 334 aa13.26□□□□□ -0.29
LMO4-203ENST00000489303 PBLDP30039 288 aaPredicted RBP13.26□□□□□ -0.29
LMO4-203ENST00000489303 CTSCP53634 463 aa13.26□□□□□ -0.29
LMO4-203ENST00000489303 MAPK10P53779 464 aa13.26□□□□□ -0.29
LMO4-203ENST00000489303 DRG2P55039 364 aaKnown RBP13.26□□□□□ -0.29
LMO4-203ENST00000489303 UBE2IP63279 158 aaKnown RBP13.26□□□□□ -0.29
LMO4-203ENST00000489303 XIAPP98170 497 aa13.26□□□□□ -0.29
LMO4-203ENST00000489303 DMPKQ09013 629 aa13.26□□□□□ -0.29
LMO4-203ENST00000489303 WDR74Q6RFH5 385 aaPredicted RBP13.26□□□□□ -0.29
LMO4-203ENST00000489303 TMPRSS9Q7Z410 1059 aa13.26□□□□□ -0.29
LMO4-203ENST00000489303 C11orf96Q7Z7L8 435 aa13.26□□□□□ -0.29
LMO4-203ENST00000489303 NXPE1Q8N323 547 aa13.26□□□□□ -0.29
LMO4-203ENST00000489303 BEND7Q8N7W2 519 aaPredicted RBP13.26□□□□□ -0.29
LMO4-203ENST00000489303 AGBL5Q8NDL9 886 aa13.26□□□□□ -0.29
LMO4-203ENST00000489303 OR52K1Q8NGK4 314 aa13.26□□□□□ -0.29
LMO4-203ENST00000489303 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.26□□□□□ -0.29
LMO4-203ENST00000489303 SGF29Q96ES7 293 aa13.26□□□□□ -0.29
LMO4-203ENST00000489303 PBKQ96KB5 322 aa13.26□□□□□ -0.29
LMO4-203ENST00000489303 HELZ2Q9BYK8 2649 aaKnown RBP13.26□□□□□ -0.29
LMO4-203ENST00000489303 VPS37BQ9H9H4 285 aa13.26□□□□□ -0.29
LMO4-203ENST00000489303 NLE1Q9NVX2 485 aaPredicted RBP13.26□□□□□ -0.29
LMO4-203ENST00000489303 SSUH2Q9Y2M2 353 aa13.26□□□□□ -0.29
LMO4-203ENST00000489303 ARHGEF17Q96PE2 2063 aaPredicted RBP13.25□□□□□ -0.29
LMO4-203ENST00000489303 HEATR9A2RTY3 570 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 MGAT4DA6NG13 374 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 AGAP14A8MT82 685 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 H7C0S8 307 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 AP3B1O00203 1094 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 EFSO43281 561 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 SUN1O94901 812 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 APRTP07741 180 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 THRAP10827 490 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 ATP1B2P14415 290 aaPredicted RBP13.25□□□□□ -0.29
LMO4-203ENST00000489303 PLA2G2AP14555 144 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 MPSTP25325 297 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 SLC5A2P31639 672 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 CXCR5P32302 372 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 SLC19A1P41440 591 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 UCNP55089 124 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 TMPRSS3P57727 454 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 CFHR1Q03591 330 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 CACNG1Q06432 222 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 CLN3Q13286 438 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 SEMA5AQ13591 1074 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 C16orf72Q14CZ0 275 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 SIX1Q15475 284 aaPredicted RBP13.25□□□□□ -0.29
LMO4-203ENST00000489303 BCL7AQ4VC05 210 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 SNAP47Q5SQN1 464 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 ZNF449Q6P9G9 518 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 ZNF574Q6ZN55 896 aaPredicted RBP13.25□□□□□ -0.29
LMO4-203ENST00000489303 TMEM26Q6ZUK4 368 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 NLRP9Q7RTR0 991 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 PLXDC1Q8IUK5 500 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 RCBTB1Q8NDN9 531 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 TTC9Q92623 222 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 CDKN2AIPNLQ96HQ2 116 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 NAP1L3Q99457 506 aaPredicted RBP13.25□□□□□ -0.29
LMO4-203ENST00000489303 TTC1Q99614 292 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 FAM96AQ9H5X1 160 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 WDR70Q9NW82 654 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 PIH1D1Q9NWS0 290 aaKnown RBP13.25□□□□□ -0.29
LMO4-203ENST00000489303 ZDHHC3Q9NYG2 299 aa13.25□□□□□ -0.29
LMO4-203ENST00000489303 SCHIP1Q9P0W5 487 aaPredicted RBP13.25□□□□□ -0.29
LMO4-203ENST00000489303 ZNF624Q9P2J8 865 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms