RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 DENND6AQ8IWF6 608 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 GSPT2Q8IYD1 628 aaKnown RBP10.87□□□□□ -0.67
UBE4B-210ENST00000488228 LILRA3Q8N6C8 439 aaPredicted RBP10.87□□□□□ -0.67
UBE4B-210ENST00000488228 ZDHHC1Q8WTX9 485 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 IFT81Q8WYA0 676 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 LRRC39Q96DD0 335 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 CERS2Q96G23 380 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 C9orf72Q96LT7 481 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 NAT9Q9BTE0 207 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 DUSP23Q9BVJ7 150 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 DPEP2Q9H4A9 486 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 SLC32A1Q9H598 525 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 FAM114A2Q9NRY5 505 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 GULP1Q9UBP9 304 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 TBC1D29Q9UFV1 150 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 FAM169AQ9Y6X4 670 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 NCOR2Q9Y618 2525 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 A6NCN8 305 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 PRR19A6NJB7 356 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 PDZK1P1A8MUH7 402 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 POP7O75817 140 aaKnown RBP10.86□□□□□ -0.67
UBE4B-210ENST00000488228 KCNK5O95279 499 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 TTC4O95801 387 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 ITGB6P18564 788 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 PMLP29590 882 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 ABCG1P45844 678 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 CARSP49589 748 aaKnown RBP10.86□□□□□ -0.67
UBE4B-210ENST00000488228 DRG2P55039 364 aaKnown RBP10.86□□□□□ -0.67
UBE4B-210ENST00000488228 SIM1P81133 766 aaPredicted RBP10.86□□□□□ -0.67
UBE4B-210ENST00000488228 CTBP1Q13363 440 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 TRIP6Q15654 476 aaKnown RBP10.86□□□□□ -0.67
UBE4B-210ENST00000488228 ZNF789Q5FWF6 425 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 CTSL3PQ5NE16 218 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 UBAP2Q5T6F2 1119 aaKnown RBP10.86□□□□□ -0.67
UBE4B-210ENST00000488228 LYPLAL1Q5VWZ2 237 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 GUSBP11Q6P575 273 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 LVRNQ6Q4G3 990 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 CERS6Q6ZMG9 384 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 AMZ2Q86W34 360 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 CILP2Q8IUL8 1156 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 NAGSQ8N159 534 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 ARL10Q8N8L6 244 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 GPR150Q8NGU9 434 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 HEXDCQ8WVB3 486 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 SCG3Q8WXD2 468 aaKnown RBP10.86□□□□□ -0.67
UBE4B-210ENST00000488228 LPGAT1Q92604 370 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 ZNF514Q96K75 400 aaPredicted RBP10.86□□□□□ -0.67
UBE4B-210ENST00000488228 FAM167BQ9BTA0 163 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 PPANQ9NQ55 473 aaKnown RBP10.86□□□□□ -0.67
UBE4B-210ENST00000488228 PRDM8Q9NQV8 689 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 FBXO6Q9NRD1 293 aaPredicted RBP10.86□□□□□ -0.67
UBE4B-210ENST00000488228 IARS2Q9NSE4 1012 aaKnown RBP10.86□□□□□ -0.67
UBE4B-210ENST00000488228 UNC13CQ8NB66 2214 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 CEP295Q9C0D2 2601 aa10.86□□□□□ -0.67
UBE4B-210ENST00000488228 CPED1A4D0V7 1026 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 IQCF5A8MTL0 148 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 PRMT5O14744 637 aaPredicted RBP10.85□□□□□ -0.67
UBE4B-210ENST00000488228 CASC3O15234 703 aaKnown RBP10.85□□□□□ -0.67
UBE4B-210ENST00000488228 EIF3HO15372 352 aaKnown RBP eCLIP10.85□□□□□ -0.67
UBE4B-210ENST00000488228 NDUFS3O75489 264 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 PIAS1O75925 651 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 AP2A2O94973 939 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 F3P13726 295 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 VCLP18206 1134 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 SDHBP21912 280 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 RPL10P27635 214 aaKnown RBP10.85□□□□□ -0.67
UBE4B-210ENST00000488228 SSTR1P30872 391 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 ID4P47928 161 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 PREPP48147 710 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 ACADVLP49748 655 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 DMPKQ09013 629 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 BOP1Q14137 746 aaKnown RBP10.85□□□□□ -0.67
UBE4B-210ENST00000488228 PUM1Q14671 1186 aaKnown RBP eCLIP10.85□□□□□ -0.67
UBE4B-210ENST00000488228 NR0B2Q15466 257 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 C14orf28Q4W4Y0 310 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 PPM1JQ5JR12 505 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 RNF187Q5TA31 235 aaPredicted RBP10.85□□□□□ -0.67
UBE4B-210ENST00000488228 DUS1LQ6P1R4 473 aaKnown RBP10.85□□□□□ -0.67
UBE4B-210ENST00000488228 NAPRTQ6XQN6 538 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 EFL1Q7Z2Z2 1120 aaKnown RBP10.85□□□□□ -0.67
UBE4B-210ENST00000488228 SDCCAG8Q86SQ7 713 aaPredicted RBP10.85□□□□□ -0.67
UBE4B-210ENST00000488228 CCNJLQ8IV13 435 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 SPNS2Q8IVW8 549 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 KRT222Q8N1A0 295 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 SDR16C5Q8N3Y7 309 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 FAM181AQ8N9Y4 354 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 GPR156Q8NFN8 814 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 GSDMBQ8TAX9 411 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 HM13Q8TCT9 377 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 SLC37A2Q8TED4 501 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 PYROXD1Q8WU10 500 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 FAM136AQ96C01 138 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 RMDN2Q96LZ7 410 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 FMO2Q99518 471 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 TTC1Q99614 292 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 CDC6Q99741 560 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 PHACTR1Q9C0D0 580 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 P2RY12Q9H244 342 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 COG4Q9H9E3 785 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 TOR4AQ9NXH8 423 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms