RNA–Protein interactions for RNA: ENST00000487989.1

PFKFB3-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 2

Gene PFKFB3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-213ENST00000487989 SLITRK4Q8IW52 837 aa13.91□□□□□ -0.18
PFKFB3-213ENST00000487989 PIANPQ8IYJ0 282 aa13.91□□□□□ -0.18
PFKFB3-213ENST00000487989 PPHLN1Q8NEY8 458 aaKnown RBP13.91□□□□□ -0.18
PFKFB3-213ENST00000487989 OR13J1Q8NGT2 312 aa13.91□□□□□ -0.18
PFKFB3-213ENST00000487989 OR10G6Q8NH81 332 aa13.91□□□□□ -0.18
PFKFB3-213ENST00000487989 HDAC10Q969S8 669 aa13.91□□□□□ -0.18
PFKFB3-213ENST00000487989 ZNF778Q96MU6 729 aa13.91□□□□□ -0.18
PFKFB3-213ENST00000487989 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.91□□□□□ -0.18
PFKFB3-213ENST00000487989 ZMYND15Q9H091 742 aa13.91□□□□□ -0.18
PFKFB3-213ENST00000487989 WASH6PQ9NQA3 447 aa13.91□□□□□ -0.18
PFKFB3-213ENST00000487989 SLC2A6Q9UGQ3 507 aa13.91□□□□□ -0.18
PFKFB3-213ENST00000487989 ZNF106Q9H2Y7 1883 aaKnown RBP13.91□□□□□ -0.18
PFKFB3-213ENST00000487989 IGLV3-16A0A075B6K0 115 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 PMS2P1A4D2B8 440 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 OR51F1A6NGY5 319 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 OR52A4PA6NMU1 304 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 AP3B1O00203 1094 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 AGRPO00253 132 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 SGTAO43765 313 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 PHF2O75151 1096 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 RBMS1P29558 406 aaKnown RBP13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 MAPK9P45984 424 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 NPY2RP49146 381 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 EIF3IQ13347 325 aaKnown RBP13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 CLCA4Q14CN2 919 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 TBC1D25Q3MII6 688 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 PCID2Q5JVF3 399 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 METRNLQ641Q3 311 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 ZNF574Q6ZN55 896 aaPredicted RBP13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 FBXO39Q8N4B4 442 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 OR2L2Q8NH16 312 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 FGF11Q92914 225 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 CXorf40BQ96DE9 158 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 SLC46A1Q96NT5 459 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 DPYSL5Q9BPU6 564 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 CHRAC1Q9NRG0 131 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 BFARQ9NZS9 450 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 FAM8A1Q9UBU6 413 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 RIMKLBQ9ULI2 386 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 PSMD13Q9UNM6 376 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 WDR37Q9Y2I8 494 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 TCAF1Q9Y4C2 921 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 PCDHGA8Q9Y5G5 932 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 ITPR1Q14643 2758 aa13.9□□□□□ -0.18
PFKFB3-213ENST00000487989 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 IGHV5-10-1A0A0J9YXX1 117 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 TCRBV7S3A2A0A539 114 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 KLHL33A6NCF5 533 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 PLD2O14939 933 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 TLX3O43711 291 aaPredicted RBP13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 DUX1O43812 170 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 DXOO77932 396 aaKnown RBP13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 TNFSF15O95150 251 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 GOT2P00505 430 aaKnown RBP13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 HOXB3P14651 431 aaPredicted RBP13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 TPSB2P20231 275 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 MPSTP25325 297 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 PRLHRP49683 370 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 EPHA4P54764 986 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 CRADDP78560 199 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 SARNPP82979 210 aaKnown RBP13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 CFHR1Q03591 330 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 ACVR1Q04771 509 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 TPSAB1Q15661 275 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 DBN1Q16643 649 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 CFAP206Q8IYR0 622 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 CLDN19Q8N6F1 224 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 OR4D9Q8NGE8 314 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 OR6P1Q8NGX9 317 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 GRK7Q8WTQ7 553 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 NCSTNQ92542 709 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.89□□□□□ -0.195e-11■■■■■ 94.1
PFKFB3-213ENST00000487989 PRR11Q96HE9 360 aaPredicted RBP13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 LINC00615Q96LM1 132 aaPredicted RBP13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 ZNF578Q96N58 590 aaPredicted RBP13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 TBC1D10AQ9BXI6 508 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 IL22Q9GZX6 179 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 UCK1Q9HA47 277 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 ASCL3Q9NQ33 180 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 LOXL2Q9Y4K0 774 aa13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 ZFC3H1O60293 1989 aaKnown RBP13.89□□□□□ -0.19
PFKFB3-213ENST00000487989 PRAMEF33A0A0G2JMD5 474 aa13.88□□□□□ -0.19
PFKFB3-213ENST00000487989 CTAGE9A4FU28 777 aa13.88□□□□□ -0.19
PFKFB3-213ENST00000487989 LILRA5A6NI73 299 aa13.88□□□□□ -0.19
PFKFB3-213ENST00000487989 POLBP06746 335 aa13.88□□□□□ -0.19
PFKFB3-213ENST00000487989 HGFP14210 728 aa13.88□□□□□ -0.19
PFKFB3-213ENST00000487989 MGAT1P26572 445 aa13.88□□□□□ -0.19
PFKFB3-213ENST00000487989 FOXN2P32314 431 aa13.88□□□□□ -0.19
PFKFB3-213ENST00000487989 CSF2RBP32927 897 aa13.88□□□□□ -0.19
PFKFB3-213ENST00000487989 NSG1P42857 185 aa13.88□□□□□ -0.19
PFKFB3-213ENST00000487989 MAGEA6P43360 314 aa13.88□□□□□ -0.19
PFKFB3-213ENST00000487989 FNTAP49354 379 aa13.88□□□□□ -0.19
PFKFB3-213ENST00000487989 LIMK2P53671 638 aa13.88□□□□□ -0.19
PFKFB3-213ENST00000487989 ERVPABLB-1P60509 514 aa13.88□□□□□ -0.19
PFKFB3-213ENST00000487989 PRAMEP78395 509 aa13.88□□□□□ -0.19
PFKFB3-213ENST00000487989 KCNJ11Q14654 390 aa13.88□□□□□ -0.19
PFKFB3-213ENST00000487989 RPE65Q16518 533 aa13.88□□□□□ -0.19
PFKFB3-213ENST00000487989 LYPLAL1Q5VWZ2 237 aa13.88□□□□□ -0.19
PFKFB3-213ENST00000487989 PAPD7Q5XG87 772 aaKnown RBP13.88□□□□□ -0.19
PFKFB3-213ENST00000487989 TMEM71Q6P5X7 295 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms