RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 FAM96AQ9H5X1 160 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 SAYSD1Q9NPB0 183 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 MRPL40Q9NQ50 206 aaKnown RBP8.15□□□□□ -1.1
SF3A1-208ENST00000485618 GULP1Q9UBP9 304 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 SLC2A6Q9UGQ3 507 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 MSRB2Q9Y3D2 182 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 HEBP2Q9Y5Z4 205 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 GCN1Q92616 2671 aaKnown RBP8.15□□□□□ -1.11
SF3A1-208ENST00000485618 GOLGA4Q13439 2230 aaKnown RBP8.14□□□□□ -1.11
SF3A1-208ENST00000485618 IGLV3-16A0A075B6K0 115 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 KIR2DS5A0A0G2JLQ3 304 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 A0A0G2JNG1 304 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 RHPN2P1A8MT19 583 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 PDZK1P1A8MUH7 402 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 E7ESA3 106 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 KIR2DS3K7RE56 304 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 IFRD1O00458 451 aaPredicted RBP8.14□□□□□ -1.11
SF3A1-208ENST00000485618 CCL22O00626 93 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 SNX2O60749 519 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 MTX2O75431 263 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 TRIM16O95361 564 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 APOA4P06727 396 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 GP1BAP07359 652 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 SLC35G4P0C7Q5 338 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 ACP5P13686 325 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 CKMT2P17540 419 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 NDUFS1P28331 727 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 FOXN2P32314 431 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 SKIV2L2P42285 1042 aaKnown RBP8.14□□□□□ -1.11
SF3A1-208ENST00000485618 MAGEA4P43358 317 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 ARSDP51689 593 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 ADARP55265 1226 aaKnown RBP8.14□□□□□ -1.11
SF3A1-208ENST00000485618 MRPS25P82663 173 aaKnown RBP8.14□□□□□ -1.11
SF3A1-208ENST00000485618 MGAT5Q09328 741 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 KRT33BQ14525 404 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 CRYMQ14894 314 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 KIR2DS5Q14953 304 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 SHBQ15464 509 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 DBN1Q16643 649 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 DEFB133Q30KQ1 61 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 TTLL9Q3SXZ7 439 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 SYTL3Q4VX76 610 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 C6orf132Q5T0Z8 1188 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 AGAP9Q5VTM2 703 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 ZNF470Q6ECI4 717 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 UGT3A1Q6NUS8 523 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 SLC30A9Q6PML9 568 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 CRTC3Q6UUV7 619 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 WASH2PQ6VEQ5 465 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 C3orf62Q6ZUJ4 267 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 CYS1Q717R9 158 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 DET1Q7L5Y6 550 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 GLRX5Q86SX6 157 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 SLC9B2Q86UD5 537 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 CILP2Q8IUL8 1156 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 TRIM48Q8IWZ4 208 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 RBM12BQ8IXT5 1001 aaKnown RBP8.14□□□□□ -1.11
SF3A1-208ENST00000485618 RASGEF1AQ8N9B8 481 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 NOA1Q8NC60 698 aaKnown RBP8.14□□□□□ -1.11
SF3A1-208ENST00000485618 FBXO36Q8NEA4 188 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 OR2L2Q8NH16 312 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 WDR48Q8TAF3 677 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 FBXO25Q8TCJ0 367 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 HM13Q8TCT9 377 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 MAPK15Q8TD08 544 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 ZDHHC1Q8WTX9 485 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 UBXN4Q92575 508 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 SGF29Q96ES7 293 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 CFAP36Q96G28 342 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 CNDP2Q96KP4 475 aaKnown RBP8.14□□□□□ -1.11
SF3A1-208ENST00000485618 LINC00615Q96LM1 132 aaPredicted RBP8.14□□□□□ -1.11
SF3A1-208ENST00000485618 ZNF778Q96MU6 729 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 FMO2Q99518 471 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.14□□□□□ -1.11
SF3A1-208ENST00000485618 OSGEPL1Q9H4B0 414 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 ARFGAP3Q9NP61 516 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 WASH6PQ9NQA3 447 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 KLC4Q9NSK0 619 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 TAAR2Q9P1P5 351 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 ZFATQ9P243 1243 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 KLF15Q9UIH9 416 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 PCOLCE2Q9UKZ9 415 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 CORO1CQ9ULV4 474 aaPredicted RBP8.14□□□□□ -1.11
SF3A1-208ENST00000485618 CHMP2BQ9UQN3 213 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 PCDHGA1Q9Y5H4 931 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 TEX264Q9Y6I9 313 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 OAS3Q9Y6K5 1087 aaKnown RBP8.14□□□□□ -1.11
SF3A1-208ENST00000485618 COLEC10Q9Y6Z7 277 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 ASCC3Q8N3C0 2202 aaKnown RBP8.14□□□□□ -1.11
SF3A1-208ENST00000485618 SPEGQ15772 3267 aa8.14□□□□□ -1.11
SF3A1-208ENST00000485618 TDRD6O60522 2096 aaKnown RBP8.14□□□□□ -1.11
SF3A1-208ENST00000485618 ZCWPW2A0A1B0GU75 182 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 UBA6A0AVT1 1052 aaPredicted RBP8.13□□□□□ -1.11
SF3A1-208ENST00000485618 PCNX2A6NKB5 2137 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 OR2AG2A6NM03 316 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 E5RI56 91 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 TMX2-CTNND1H3BSU7 103 aa8.13□□□□□ -1.11
SF3A1-208ENST00000485618 GAPDHSO14556 408 aaPredicted RBP8.13□□□□□ -1.11
SF3A1-208ENST00000485618 LIN7AO14910 233 aaPredicted RBP8.13□□□□□ -1.11
SF3A1-208ENST00000485618 SIGLEC6O43699 453 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms