RNA–Protein interactions for RNA: ENST00000484141.5

PCGF3-211, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-211ENST00000484141 ITGB6P18564 788 aa16.39■□□□□ 0.21
PCGF3-211ENST00000484141 XRCC1P18887 633 aaPredicted RBP16.39■□□□□ 0.21
PCGF3-211ENST00000484141 LEPRP48357 1165 aaKnown RBP16.39■□□□□ 0.21
PCGF3-211ENST00000484141 PPP1CAP62136 330 aa16.39■□□□□ 0.21
PCGF3-211ENST00000484141 TRA2AQ13595 282 aaKnown RBP eCLIP16.39■□□□□ 0.21
PCGF3-211ENST00000484141 NFE2L1Q14494 772 aa16.39■□□□□ 0.21
PCGF3-211ENST00000484141 WDR74Q6RFH5 385 aaPredicted RBP16.39■□□□□ 0.21
PCGF3-211ENST00000484141 ABRAXAS1Q6UWZ7 409 aa16.39■□□□□ 0.21
PCGF3-211ENST00000484141 TMEM26Q6ZUK4 368 aa16.39■□□□□ 0.21
PCGF3-211ENST00000484141 FAM71DQ8N9W8 422 aa16.39■□□□□ 0.21
PCGF3-211ENST00000484141 ZNF398Q8TD17 642 aa16.39■□□□□ 0.21
PCGF3-211ENST00000484141 RSC1A1Q92681 617 aa16.39■□□□□ 0.21
PCGF3-211ENST00000484141 PIH1D1Q9NWS0 290 aaKnown RBP16.39■□□□□ 0.21
PCGF3-211ENST00000484141 HACD3Q9P035 362 aa16.39■□□□□ 0.21
PCGF3-211ENST00000484141 AKAP7Q9P0M2 348 aaPredicted RBP16.39■□□□□ 0.21
PCGF3-211ENST00000484141 PKP3Q9Y446 797 aa16.39■□□□□ 0.21
PCGF3-211ENST00000484141 CFAP20Q9Y6A4 193 aaKnown RBP16.39■□□□□ 0.21
PCGF3-211ENST00000484141 BOD1L1Q8NFC6 3051 aa16.39■□□□□ 0.21
PCGF3-211ENST00000484141 UBR5O95071 2799 aaPredicted RBP16.38■□□□□ 0.21
PCGF3-211ENST00000484141 SGTAO43765 313 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 KIF1CO43896 1103 aaKnown RBP16.38■□□□□ 0.21
PCGF3-211ENST00000484141 ANXA9O76027 345 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 TJP3O95049 919 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 PRAMEF1O95521 474 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 VIPP01282 170 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 SFTPCP11686 197 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 TPH1P17752 444 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 TNNT3P45378 269 aaPredicted RBP16.38■□□□□ 0.21
PCGF3-211ENST00000484141 CDKN1CP49918 316 aaPredicted RBP16.38■□□□□ 0.21
PCGF3-211ENST00000484141 XIAPP98170 497 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 KLF1Q13351 362 aaPredicted RBP16.38■□□□□ 0.21
PCGF3-211ENST00000484141 GTF2H3Q13889 308 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 GPR18Q14330 331 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 TAF1AQ15573 450 aaPredicted RBP16.38■□□□□ 0.21
PCGF3-211ENST00000484141 KCTD19Q17RG1 926 aaPredicted RBP16.38■□□□□ 0.21
PCGF3-211ENST00000484141 MANEAQ5SRI9 462 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 ITPRIPL1Q6GPH6 555 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 DUS1LQ6P1R4 473 aaKnown RBP16.38■□□□□ 0.21
PCGF3-211ENST00000484141 PRUNE1Q86TP1 453 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 TRIM48Q8IWZ4 208 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 LILRA3Q8N6C8 439 aaPredicted RBP16.38■□□□□ 0.21
PCGF3-211ENST00000484141 DDHD1Q8NEL9 900 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 ATG4AQ8WYN0 398 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 NKD1Q969G9 470 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 SH3KBP1Q96B97 665 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 TGM7Q96PF1 710 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 TBL1YQ9BQ87 522 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 STN1Q9H668 368 aaKnown RBP16.38■□□□□ 0.21
PCGF3-211ENST00000484141 FAM8A1Q9UBU6 413 aa16.38■□□□□ 0.21
PCGF3-211ENST00000484141 LILRA5A6NI73 299 aa16.37■□□□□ 0.21
PCGF3-211ENST00000484141 OR5K4A6NMS3 321 aa16.37■□□□□ 0.21
PCGF3-211ENST00000484141 SLC2A4P14672 509 aa16.37■□□□□ 0.21
PCGF3-211ENST00000484141 LPOP22079 712 aaPredicted RBP16.37■□□□□ 0.21
PCGF3-211ENST00000484141 IDSP22304 550 aa16.37■□□□□ 0.21
PCGF3-211ENST00000484141 CDC25BP30305 580 aa16.37■□□□□ 0.21
PCGF3-211ENST00000484141 SEPHS1P49903 392 aa16.37■□□□□ 0.21
PCGF3-211ENST00000484141 EPHA4P54764 986 aa16.37■□□□□ 0.21
PCGF3-211ENST00000484141 KIF5AQ12840 1032 aa16.37■□□□□ 0.21
PCGF3-211ENST00000484141 FNBP1LQ5T0N5 605 aa16.37■□□□□ 0.21
PCGF3-211ENST00000484141 RTP4Q96DX8 246 aa16.37■□□□□ 0.21
PCGF3-211ENST00000484141 TTC25Q96NG3 672 aa16.37■□□□□ 0.21
PCGF3-211ENST00000484141 TMEM121Q9BTD3 319 aa16.37■□□□□ 0.21
PCGF3-211ENST00000484141 ASB8Q9H765 288 aa16.37■□□□□ 0.21
PCGF3-211ENST00000484141 SLC40A1Q9NP59 571 aa16.37■□□□□ 0.21
PCGF3-211ENST00000484141 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.37■□□□□ 0.21
PCGF3-211ENST00000484141 ANKMY1Q9P2S6 941 aa16.37■□□□□ 0.21
PCGF3-211ENST00000484141 PCDHGA4Q9Y5G9 962 aa16.37■□□□□ 0.21
PCGF3-211ENST00000484141 PCDHGA3Q9Y5H0 932 aa16.37■□□□□ 0.21
PCGF3-211ENST00000484141 BSNQ9UPA5 3926 aa16.37■□□□□ 0.21
PCGF3-211ENST00000484141 CCDC78A2IDD5 438 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 C5orf60A6NFR6 353 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 CAPN5O15484 640 aaPredicted RBP16.36■□□□□ 0.21
PCGF3-211ENST00000484141 SRP72O76094 671 aaKnown RBP16.36■□□□□ 0.21
PCGF3-211ENST00000484141 UBXN7O94888 489 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 AKT1P31749 480 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 ZNF140P52738 457 aaPredicted RBP16.36■□□□□ 0.21
PCGF3-211ENST00000484141 SH3BP2P78314 561 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 MC2RQ01718 297 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 PRPSAP1Q14558 356 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 RPE65Q16518 533 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 LDLRAP1Q5SW96 308 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 TMEM164Q5U3C3 297 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 KCTD11Q693B1 232 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 TIPARPQ7Z3E1 657 aaKnown RBP16.36■□□□□ 0.21
PCGF3-211ENST00000484141 AMZ2Q86W34 360 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 KLHDC8BQ8IXV7 354 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 SPDYE1Q8NFV5 336 aaPredicted RBP16.36■□□□□ 0.21
PCGF3-211ENST00000484141 DTX3LQ8TDB6 740 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 BRSK1Q8TDC3 778 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 CXorf40BQ96DE9 158 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 HES6Q96HZ4 224 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 CALR3Q96L12 384 aaKnown RBP16.36■□□□□ 0.21
PCGF3-211ENST00000484141 C9orf72Q96LT7 481 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 NRTNQ99748 197 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 DPYSL5Q9BPU6 564 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.36■□□□□ 0.21
PCGF3-211ENST00000484141 SPRY4Q9C004 299 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 IMPACTQ9P2X3 320 aa16.36■□□□□ 0.21
PCGF3-211ENST00000484141 AAR2Q9Y312 384 aaKnown RBP16.36■□□□□ 0.21
PCGF3-211ENST00000484141 MN1Q10571 1320 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms