RNA–Protein interactions for RNA: ENST00000478588.5

AFF4-208, Transcript of AF4/FMR2 family member 4, human

TSL 3

Gene AFF4, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFF4-208	ENST00000478588	ELP5	Q8TE02	316 aa		4.35	□□□□□ -1.71
AFF4-208	ENST00000478588	GDPD5	Q8WTR4	605 aa		4.35	□□□□□ -1.71
AFF4-208	ENST00000478588	HDAC7	Q8WUI4	952 aa		4.35	□□□□□ -1.71
AFF4-208	ENST00000478588	TRAPPC12	Q8WVT3	735 aa		4.35	□□□□□ -1.71
AFF4-208	ENST00000478588	MRPL38	Q96DV4	380 aa	Known RBP	4.35	□□□□□ -1.71
AFF4-208	ENST00000478588	KTI12	Q96EK9	354 aa	Predicted RBP	4.35	□□□□□ -1.71
AFF4-208	ENST00000478588	MBOAT7	Q96N66	472 aa		4.35	□□□□□ -1.71
AFF4-208	ENST00000478588	FRG2B	Q96QU4	278 aa		4.35	□□□□□ -1.71
AFF4-208	ENST00000478588	IFT27	Q9BW83	186 aa		4.35	□□□□□ -1.71
AFF4-208	ENST00000478588	GCOM2	Q9BZD3	368 aa	Predicted RBP	4.35	□□□□□ -1.71
AFF4-208	ENST00000478588	NAT10	Q9H0A0	1025 aa	Known RBP	4.35	□□□□□ -1.71
AFF4-208	ENST00000478588	UNC45A	Q9H3U1	944 aa		4.35	□□□□□ -1.71
AFF4-208	ENST00000478588	CXorf56	Q9H5V9	222 aa		4.35	□□□□□ -1.71
AFF4-208	ENST00000478588	CATSPERB	Q9H7T0	1116 aa		4.35	□□□□□ -1.71
AFF4-208	ENST00000478588	NLK	Q9UBE8	527 aa		4.35	□□□□□ -1.71
AFF4-208	ENST00000478588	FZD10	Q9ULW2	581 aa		4.35	□□□□□ -1.71
AFF4-208	ENST00000478588	PADI3	Q9ULW8	664 aa		4.35	□□□□□ -1.71
AFF4-208	ENST00000478588	KCNJ14	Q9UNX9	436 aa		4.35	□□□□□ -1.71
AFF4-208	ENST00000478588	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.35	□□□□□ -1.71
AFF4-208	ENST00000478588	EPOP	A6NHQ4	379 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	TTC36	A6NLP5	189 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	CREB3	O43889	395 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	JAK2	O60674	1132 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	KIN	O60870	393 aa	Known RBP	4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	CTDNEP1	O95476	244 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	CBX6	O95503	412 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	YEATS4	O95619	227 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	MMP1	P03956	469 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	VTN	P04004	478 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	DARS	P14868	501 aa	Known RBP	4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	PTPN9	P43378	593 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	CLCN3	P51790	818 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	DSCR9	P59020	149 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	NLRP11	P59045	1033 aa	Known RBP	4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	CCZ1B	P86790	482 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	CCZ1	P86791	482 aa	Predicted RBP	4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	UBE3A	Q05086	875 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	ORC2	Q13416	577 aa	Predicted RBP	4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	NFATC4	Q14934	902 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	ASIC2	Q16515	512 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	CAMK4	Q16566	473 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	CALCRL	Q16602	461 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	TMEM266	Q2M3C6	531 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	TCTN1	Q2MV58	587 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	RUNDC3A	Q59EK9	446 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	FSCB	Q5H9T9	825 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	C10orf62	Q5T681	223 aa	Predicted RBP	4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	TAF3	Q5VWG9	929 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	ADAL	Q6DHV7	355 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	FAM173B	Q6P4H8	233 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	TMCO2	Q7Z6W1	182 aa	Predicted RBP	4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	RBM23	Q86U06	439 aa	Known RBP	4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	WDR5B	Q86VZ2	330 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	ADHFE1	Q8IWW8	467 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	SUGP1	Q8IWZ8	645 aa	Known RBP	4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	DHX40	Q8IX18	779 aa	Known RBP	4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	C4orf19	Q8IY42	314 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	DIS3L2	Q8IYB7	885 aa	Known RBP	4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	CEP57L1	Q8IYX8	460 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	DCP1B	Q8IZD4	617 aa	Known RBP	4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	LRRC43	Q8N309	656 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	CCDC112	Q8NEF3	446 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	ZNF397	Q8NF99	534 aa	Predicted RBP	4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	ETNPPL	Q8TBG4	499 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	TCP11	Q8WWU5	503 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	PSPC1	Q8WXF1	523 aa	Known RBP	4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	P2RX5	Q93086	422 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	C8orf76	Q96K31	380 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	LMLN	Q96KR4	655 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	CEP170P1	Q96L14	293 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	TIGD1	Q96MW7	591 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	MRPL9	Q9BYD2	267 aa	Known RBP	4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	CTDSP1	Q9GZU7	261 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	LHPP	Q9H008	270 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	TMEM117	Q9H0C3	514 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	UBE2Z	Q9H832	354 aa	Predicted RBP	4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	KCNMB3	Q9NPA1	279 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	RGS18	Q9NS28	235 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	TMLHE	Q9NVH6	421 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	TMEM161A	Q9NX61	479 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	RAI2	Q9Y5P3	530 aa		4.34	□□□□□ -1.71
AFF4-208	ENST00000478588	COL6A3	P12111	3177 aa		4.33	□□□□□ -1.72
AFF4-208	ENST00000478588	LAMA2	P24043	3122 aa	Known RBP	4.33	□□□□□ -1.72
AFF4-208	ENST00000478588		A0A0U1RQF3	1178 aa		4.33	□□□□□ -1.72
AFF4-208	ENST00000478588	FAM237A	A0A1B0GTK4	181 aa		4.33	□□□□□ -1.72
AFF4-208	ENST00000478588	TMEM247	A6NEH6	219 aa		4.33	□□□□□ -1.72
AFF4-208	ENST00000478588	SAC3D1	A6NKF1	404 aa		4.33	□□□□□ -1.72
AFF4-208	ENST00000478588		B9A039	149 aa		4.33	□□□□□ -1.72
AFF4-208	ENST00000478588	PRR23D1	E9PI22	279 aa	Predicted RBP	4.33	□□□□□ -1.72
AFF4-208	ENST00000478588	ASAP2	O43150	1006 aa		4.33	□□□□□ -1.72
AFF4-208	ENST00000478588	SLC37A4	O43826	429 aa		4.33	□□□□□ -1.72
AFF4-208	ENST00000478588	FAM155B	O75949	473 aa		4.33	□□□□□ -1.72
AFF4-208	ENST00000478588	CLDN7	O95471	211 aa		4.33	□□□□□ -1.72
AFF4-208	ENST00000478588	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.33	□□□□□ -1.72
AFF4-208	ENST00000478588	CD72	P21854	359 aa		4.33	□□□□□ -1.72
AFF4-208	ENST00000478588	GNLY	P22749	145 aa		4.33	□□□□□ -1.72
AFF4-208	ENST00000478588	YWHAB	P31946	246 aa	Known RBP	4.33	□□□□□ -1.72
AFF4-208	ENST00000478588	RFC1	P35251	1148 aa	Predicted RBP	4.33	□□□□□ -1.72
AFF4-208	ENST00000478588	PNPLA4	P41247	253 aa		4.33	□□□□□ -1.72
AFF4-208	ENST00000478588	DPP6	P42658	865 aa		4.33	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms