RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 CHRM3P20309 590 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 XPAP23025 273 aaPredicted RBP17.27■□□□□ 0.36
HSPG2-208ENST00000471322 ACRV1P26436 265 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 IL2P60568 153 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 NFKB2Q00653 900 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 CHRNA6Q15825 494 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 CTSL3PQ5NE16 218 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 PTRHD1Q6GMV3 140 aaKnown RBP17.27■□□□□ 0.36
HSPG2-208ENST00000471322 PAQR3Q6TCH7 311 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 ASCL5Q7RTU5 278 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 FAM124AQ86V42 546 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 STAG3L4Q8TBR4 150 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 DTX3LQ8TDB6 740 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 KIAA1191Q96A73 305 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 SKA1Q96BD8 255 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 GPR21Q99679 349 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 CDH19Q9H159 772 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 EML4Q9HC35 981 aaKnown RBP17.27■□□□□ 0.36
HSPG2-208ENST00000471322 DNAJC28Q9NX36 388 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 VTI1BQ9UEU0 232 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 MED16Q9Y2X0 877 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 ANKRD36A6QL64 1941 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 SYCE1LA8MT33 242 aa17.26■□□□□ 0.35
HSPG2-208ENST00000471322 AGAP14A8MT82 685 aa17.26■□□□□ 0.35
HSPG2-208ENST00000471322 HNRNPCL1O60812 293 aaKnown RBP17.26■□□□□ 0.35
HSPG2-208ENST00000471322 DNAJC8O75937 253 aaPredicted RBP17.26■□□□□ 0.35
HSPG2-208ENST00000471322 ACADMP11310 421 aa17.26■□□□□ 0.35
HSPG2-208ENST00000471322 P2RY2P41231 377 aa17.26■□□□□ 0.35
HSPG2-208ENST00000471322 MAP7D1Q3KQU3 841 aa17.26■□□□□ 0.35
HSPG2-208ENST00000471322 RAB44Q7Z6P3 723 aaPredicted RBP17.26■□□□□ 0.35
HSPG2-208ENST00000471322 CLNKQ7Z7G1 428 aa17.26■□□□□ 0.35
HSPG2-208ENST00000471322 NXPE1Q8N323 547 aa17.26■□□□□ 0.35
HSPG2-208ENST00000471322 SGF29Q96ES7 293 aa17.26■□□□□ 0.35
HSPG2-208ENST00000471322 RILPQ96NA2 401 aa17.26■□□□□ 0.35
HSPG2-208ENST00000471322 TRMOQ9BU70 441 aa17.26■□□□□ 0.35
HSPG2-208ENST00000471322 UNKQ9C0B0 810 aaKnown RBP17.26■□□□□ 0.35
HSPG2-208ENST00000471322 PNPOQ9NVS9 261 aa17.26■□□□□ 0.35
HSPG2-208ENST00000471322 MBD1Q9UIS9 605 aaPredicted RBP17.26■□□□□ 0.35
HSPG2-208ENST00000471322 TMCO1Q9UM00 188 aa17.26■□□□□ 0.35
HSPG2-208ENST00000471322 ZNF292O60281 2723 aa17.26■□□□□ 0.35
HSPG2-208ENST00000471322 PTPRZ1P23471 2315 aaPredicted RBP17.25■□□□□ 0.35
HSPG2-208ENST00000471322 A8MT66 165 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 A8MX80 341 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 MYO1CO00159 1063 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 MAP3K13O43283 966 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 ZBTB14O43829 449 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 LMNAP02545 664 aaKnown RBP17.25■□□□□ 0.35
HSPG2-208ENST00000471322 TIMP2P16035 220 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 IMPDH1P20839 514 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 LHCGRP22888 699 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 SERPINB3P29508 390 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 ARRB2P32121 409 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 PSMD8P48556 350 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 SPINT3P49223 89 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 RASSF2P50749 326 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 RPL14P50914 215 aaKnown RBP17.25■□□□□ 0.35
HSPG2-208ENST00000471322 TPMTP51580 245 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 METAP1P53582 386 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 NAA20P61599 178 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 RPS14P62263 151 aaKnown RBP17.25■□□□□ 0.35
HSPG2-208ENST00000471322 GALNT1Q10472 559 aaPredicted RBP17.25■□□□□ 0.35
HSPG2-208ENST00000471322 SETMARQ53H47 684 aaPredicted RBP17.25■□□□□ 0.35
HSPG2-208ENST00000471322 ARL13AQ5H913 290 aaPredicted RBP17.25■□□□□ 0.35
HSPG2-208ENST00000471322 FAM91A1Q658Y4 838 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 CCNYL1Q8N7R7 359 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 SUMF1Q8NBK3 374 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 GPR26Q8NDV2 337 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 TMIEQ8NEW7 156 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 STON2Q8WXE9 905 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 PDLIM5Q96HC4 596 aaKnown RBP17.25■□□□□ 0.35
HSPG2-208ENST00000471322 FAM129BQ96TA1 746 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 DHRS7Q9Y394 339 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 OTOGLQ3ZCN5 2332 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 HGSO14964 777 aaPredicted RBP17.25■□□□□ 0.35
HSPG2-208ENST00000471322 KERAO60938 352 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 NIPSNAP2O75323 286 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 CNR2P34972 360 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 PLA2G5P39877 138 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 DCDC1P59894 354 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 SPRED3Q2MJR0 410 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 ERAP2Q6P179 960 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 MACC1Q6ZN28 852 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 ARMCX6Q7L4S7 300 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 TTC7BQ86TV6 843 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 RAVER1Q8IY67 606 aaKnown RBP17.25■□□□□ 0.35
HSPG2-208ENST00000471322 TMEFF1Q8IYR6 380 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 ZNF781Q8N8C0 355 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 GANCQ8TET4 914 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 OR8D1Q8WZ84 308 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 INPP5DQ92835 1189 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 PTERQ96BW5 349 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 L3HYPDHQ96EM0 354 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 SPACA7Q96KW9 195 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 RSPH9Q9H1X1 276 aaPredicted RBP17.25■□□□□ 0.35
HSPG2-208ENST00000471322 PCDH12Q9NPG4 1184 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 ZDHHC3Q9NYG2 299 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 SARDHQ9UL12 918 aa17.25■□□□□ 0.35
HSPG2-208ENST00000471322 NUMA1Q14980 2115 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 BPTFQ12830 3046 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms