RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 GDAP1Q8TB36 358 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 ACTL9Q8TC94 416 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 BLOC1S5Q8TDH9 187 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 NCSTNQ92542 709 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 ZPBPQ9BS86 351 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 OSGEPL1Q9H4B0 414 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 BPIFA1Q9NP55 256 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 PRDM8Q9NQV8 689 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 POT1Q9NUX5 634 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 SLC23A2Q9UGH3 650 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 TMPRSS11EQ9UL52 423 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 DUSP10Q9Y6W6 482 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 GLYATL1P3A0A0U1RQE8 302 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 GRID2IPA4D2P6 1211 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 KLHL33A6NCF5 533 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 C5orf60A6NFR6 353 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 C2orf81A6NN90 581 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 VIPP01282 170 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 RBP3P10745 1247 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 CHRNA4P43681 627 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 PPM1FP49593 454 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-211ENST00000471260 ATP1A2P50993 1020 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 PDE1BQ01064 536 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 PRPSAP1Q14558 356 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 TGIF1Q15583 401 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 DCAF12Q5T6F0 453 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 CRTC3Q6UUV7 619 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 RANBP10Q6VN20 620 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 TMEM26Q6ZUK4 368 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 ZFAND4Q86XD8 727 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 ZNF761Q86XN6 746 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-211ENST00000471260 ZNF547Q8IVP9 402 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 TRIM48Q8IWZ4 208 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 SYCE1Q8N0S2 351 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 GOLGA6L1Q8N7Z2 621 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 NOA1Q8NC60 698 aaKnown RBP13.28□□□□□ -0.28
HMGN1-211ENST00000471260 DDHD1Q8NEL9 900 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 LRRC45Q96CN5 670 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 ZNF514Q96K75 400 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-211ENST00000471260 LACRTQ9GZZ8 138 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 FBXO8Q9NRD0 319 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 SMOXQ9NWM0 555 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 SLC39A1Q9NY26 324 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 TMEM9Q9P0T7 183 aa13.28□□□□□ -0.28
HMGN1-211ENST00000471260 EFCAB7A8K855 629 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 PDZK1P1A8MUH7 402 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 MIF4GDA9UHW6 222 aaKnown RBP13.27□□□□□ -0.29
HMGN1-211ENST00000471260 STX7O15400 261 aaKnown RBP13.27□□□□□ -0.29
HMGN1-211ENST00000471260 TOX3O15405 576 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-211ENST00000471260 MTX2O75431 263 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 ITGB2P05107 769 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 ANKRD34CP0C6C1 535 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 RHOXF2BP0C7M4 288 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 LPOP22079 712 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-211ENST00000471260 MPSTP25325 297 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 SLC19A1P41440 591 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 EIF3EP60228 445 aaKnown RBP13.27□□□□□ -0.29
HMGN1-211ENST00000471260 MC2RQ01718 297 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 DMPKQ09013 629 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 TAF1AQ15573 450 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-211ENST00000471260 KHDC1Q4VXA5 237 aaKnown RBP13.27□□□□□ -0.29
HMGN1-211ENST00000471260 ANKRD20A2Q5SQ80 823 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 ANKRD20A1Q5TYW2 823 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 ANKRD20A3Q5VUR7 823 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 C11orf96Q7Z7L8 435 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 AMZ2Q86W34 360 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 FAM129CQ86XR2 697 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 TRAPPC5Q8IUR0 188 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 UBL4BQ8N7F7 174 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 BMPERQ8N8U9 685 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 LRRC57Q8N9N7 239 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 TTC13Q8NBP0 860 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 ART4Q93070 314 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 SGF29Q96ES7 293 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 RHOXF2Q9BQY4 288 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 WDR70Q9NW82 654 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 TRIM10Q9UDY6 481 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 FEZ2Q9UHY8 353 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-211ENST00000471260 AMFRQ9UKV5 643 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 B3GALT1Q9Y5Z6 326 aa13.27□□□□□ -0.29
HMGN1-211ENST00000471260 MGAQ8IWI9 3026 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 MACROD2A1Z1Q3 448 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 AGRPO00253 132 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 KCNN4O15554 427 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 C1QL1O75973 258 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 UBXN7O94888 489 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 CRTAMO95727 393 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 AGTP01019 485 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 C9P02748 559 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 PYGMP11217 842 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 ADRA1AP35348 466 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 HALP42357 657 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 PAFAH1B1P43034 410 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 ARSDP51689 593 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 MN1Q10571 1320 aaPredicted RBP13.26□□□□□ -0.29
HMGN1-211ENST00000471260 CHRNA6Q15825 494 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 DARS2Q6PI48 645 aaKnown RBP13.26□□□□□ -0.29
HMGN1-211ENST00000471260 FAM151BQ6UXP7 276 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 CEACAM20Q6UY09 585 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 PEX26Q7Z412 305 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms