RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 FNBP1LQ5T0N5 605 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 GPRC6AQ5T6X5 926 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 BBS12Q6ZW61 710 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 KIAA1328Q86T90 577 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 ZNF547Q8IVP9 402 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 ZNF398Q8TD17 642 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 RNF31Q96EP0 1072 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 ZNF514Q96K75 400 aaPredicted RBP17.2■□□□□ 0.34
COL7A1-206ENST00000466591 PPP1R2P1Q96PQ5 205 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 SLC12A9Q9BXP2 914 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 TRIM4Q9C037 500 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 SLC25A18Q9H1K4 315 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 ADNPQ9H2P0 1102 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 CLMPQ9H6B4 373 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 UGT1A7Q9HAW7 530 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 UGT1A10Q9HAW8 530 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 UGT1A8Q9HAW9 530 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 IL17CQ9P0M4 197 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 CRLS1Q9UJA2 301 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 SLC30A1Q9Y6M5 507 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 AHCTF1Q8WYP5 2266 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 SDK2Q58EX2 2172 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 GCN1Q92616 2671 aaKnown RBP17.2■□□□□ 0.34
COL7A1-206ENST00000466591 GOLGA6L9A6NEM1 432 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 KCNN4O15554 427 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 TJP3O95049 919 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 CRTAMO95727 393 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 SLC35G4P0C7Q5 338 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 LPOP22079 712 aaPredicted RBP17.19■□□□□ 0.34
COL7A1-206ENST00000466591 LEPRP48357 1165 aaKnown RBP17.19■□□□□ 0.34
COL7A1-206ENST00000466591 NFKB2Q00653 900 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 PDE1BQ01064 536 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 OTUD4Q01804 1114 aaKnown RBP17.19■□□□□ 0.34
COL7A1-206ENST00000466591 ADCY2Q08462 1091 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 KCNAB2Q13303 367 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 C6orf15Q6UXA7 325 aaPredicted RBP17.19■□□□□ 0.34
COL7A1-206ENST00000466591 WASH2PQ6VEQ5 465 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 BEND7Q8N7W2 519 aaPredicted RBP17.19■□□□□ 0.34
COL7A1-206ENST00000466591 RASGEF1AQ8N9B8 481 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 DDHD1Q8NEL9 900 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 STARD8Q92502 1023 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 RSC1A1Q92681 617 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 KRT35Q92764 455 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 SLC45A3Q96JT2 553 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 ASB8Q9H765 288 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 PDE7BQ9NP56 450 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 SLC40A1Q9NP59 571 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 WASH6PQ9NQA3 447 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 GEMIN8Q9NWZ8 242 aaKnown RBP17.19■□□□□ 0.34
COL7A1-206ENST00000466591 ARL5AQ9Y689 179 aa17.19■□□□□ 0.34
COL7A1-206ENST00000466591 EPN1Q9Y6I3 576 aaPredicted RBP17.19■□□□□ 0.34
COL7A1-206ENST00000466591 LOC101059948A0A1B0GTJ6 334 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 UBA6A0AVT1 1052 aaPredicted RBP17.18■□□□□ 0.34
COL7A1-206ENST00000466591 CCDC66A2RUB6 948 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 CFAP99D6REC4 459 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 GPR39O43194 453 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 KATNA1O75449 491 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 ZNF189O75820 626 aaPredicted RBP17.18■□□□□ 0.34
COL7A1-206ENST00000466591 NDUFA10O95299 355 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 LCA5LO95447 670 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 AGTP01019 485 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 C9P02748 559 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 CTNNA1P35221 906 aaKnown RBP17.18■□□□□ 0.34
COL7A1-206ENST00000466591 DLSTP36957 453 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 RWDD2BP57060 319 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 IL11RAQ14626 422 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 CLCA4Q14CN2 919 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 TMTC1Q8IUR5 882 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 SIDT2Q8NBJ9 832 aaKnown RBP17.18■□□□□ 0.34
COL7A1-206ENST00000466591 OR4K2Q8NGD2 314 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 ACTL9Q8TC94 416 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 ALS2CR12Q96Q35 445 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 APOL2Q9BQE5 337 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 OSBPL8Q9BZF1 889 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 ZNF768Q9H5H4 540 aaKnown RBP17.18■□□□□ 0.34
COL7A1-206ENST00000466591 C10orf88Q9H8K7 445 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 STARD5Q9NSY2 213 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 OGFRQ9NZT2 677 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 TMEM184BQ9Y519 407 aaPredicted RBP17.18■□□□□ 0.34
COL7A1-206ENST00000466591 DNMT3AQ9Y6K1 912 aaPredicted RBP17.18■□□□□ 0.34
COL7A1-206ENST00000466591 RPS6KL1Q9Y6S9 549 aa17.18■□□□□ 0.34
COL7A1-206ENST00000466591 SOWAHDA6NJG2 315 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 NKX2-8O15522 239 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 KIAA0754O94854 1291 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 MT-ND3P03897 115 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 RBP3P10745 1247 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 BRAFP15056 766 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 CTSCP53634 463 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 SH3BP2P78314 561 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 TMPRSS15P98073 1019 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 CDC20Q12834 499 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 NFE2L1Q14494 772 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 TAF1AQ15573 450 aaPredicted RBP17.17■□□□□ 0.34
COL7A1-206ENST00000466591 RPE65Q16518 533 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 DEFB109BQ30KR1 87 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 DNTTIP2Q5QJE6 756 aaKnown RBP17.17■□□□□ 0.34
COL7A1-206ENST00000466591 ANKRD20A2Q5SQ80 823 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 ANKRD20A1Q5TYW2 823 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 ANKRD20A3Q5VUR7 823 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 ZNF449Q6P9G9 518 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms