RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 SIX1Q15475 284 aaPredicted RBP18.11■□□□□ 0.49
PDLIM2-214ENST00000452226 PARP6Q2NL67 630 aa18.11■□□□□ 0.49
PDLIM2-214ENST00000452226 ATG14Q6ZNE5 492 aa18.11■□□□□ 0.49
PDLIM2-214ENST00000452226 LRRTM4Q86VH4 590 aa18.11■□□□□ 0.49
PDLIM2-214ENST00000452226 ATG4AQ8WYN0 398 aa18.11■□□□□ 0.49
PDLIM2-214ENST00000452226 FBXO8Q9NRD0 319 aa18.11■□□□□ 0.49
PDLIM2-214ENST00000452226 STARD5Q9NSY2 213 aa18.11■□□□□ 0.49
PDLIM2-214ENST00000452226 SCHIP1Q9P0W5 487 aaPredicted RBP18.11■□□□□ 0.49
PDLIM2-214ENST00000452226 PILRAQ9UKJ1 303 aa18.11■□□□□ 0.49
PDLIM2-214ENST00000452226 DNAJC16Q9Y2G8 782 aa18.11■□□□□ 0.49
PDLIM2-214ENST00000452226 VEGFDO43915 354 aa18.1■□□□□ 0.49
PDLIM2-214ENST00000452226 VIPP01282 170 aa18.1■□□□□ 0.49
PDLIM2-214ENST00000452226 XRCC1P18887 633 aaPredicted RBP18.1■□□□□ 0.49
PDLIM2-214ENST00000452226 STIP1P31948 543 aaKnown RBP18.1■□□□□ 0.49
PDLIM2-214ENST00000452226 MSLNQ13421 630 aaPredicted RBP18.1■□□□□ 0.49
PDLIM2-214ENST00000452226 KHDC1Q4VXA5 237 aaKnown RBP18.1■□□□□ 0.49
PDLIM2-214ENST00000452226 KCTD11Q693B1 232 aa18.1■□□□□ 0.49
PDLIM2-214ENST00000452226 CEACAM20Q6UY09 585 aa18.1■□□□□ 0.49
PDLIM2-214ENST00000452226 PLXDC1Q8IUK5 500 aa18.1■□□□□ 0.49
PDLIM2-214ENST00000452226 TRIM48Q8IWZ4 208 aa18.1■□□□□ 0.49
PDLIM2-214ENST00000452226 DTX3LQ8TDB6 740 aa18.1■□□□□ 0.49
PDLIM2-214ENST00000452226 TIMM29Q9BSF4 260 aa18.1■□□□□ 0.49
PDLIM2-214ENST00000452226 FICDQ9BVA6 458 aa18.1■□□□□ 0.49
PDLIM2-214ENST00000452226 FSD1LQ9BXM9 530 aa18.1■□□□□ 0.49
PDLIM2-214ENST00000452226 ARNT2Q9HBZ2 717 aa18.1■□□□□ 0.49
PDLIM2-214ENST00000452226 BPIFA1Q9NP55 256 aa18.1■□□□□ 0.49
PDLIM2-214ENST00000452226 IL17CQ9P0M4 197 aa18.1■□□□□ 0.49
PDLIM2-214ENST00000452226 MAST4O15021 2626 aa18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 MN1Q10571 1320 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 PDZK1P1A8MUH7 402 aa18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 CDK14O94921 469 aa18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 METTL18O95568 372 aa18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 ITGB6P18564 788 aa18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 CLCA4Q14CN2 919 aa18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 SEPT7Q16181 437 aaKnown RBP18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 DENND5AQ6IQ26 1287 aa18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 ARHGEF18Q6ZSZ5 1173 aa18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 TMEM26Q6ZUK4 368 aa18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 ZNF547Q8IVP9 402 aa18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 NLGN4XQ8N0W4 816 aa18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 NLGN4YQ8NFZ3 816 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 C1orf54Q8WWF1 131 aa18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 ZPBPQ9BS86 351 aa18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 SPRY4Q9C004 299 aa18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 UCK1Q9HA47 277 aa18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 APMAPQ9HDC9 416 aa18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 ZNF624Q9P2J8 865 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 IL17BQ9UHF5 180 aa18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 TMPRSS11EQ9UL52 423 aa18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 ZNF106Q9H2Y7 1883 aaKnown RBP18.09■□□□□ 0.49
PDLIM2-214ENST00000452226 PRR19A6NJB7 356 aa18.08■□□□□ 0.48
PDLIM2-214ENST00000452226 UBXN7O94888 489 aa18.08■□□□□ 0.48
PDLIM2-214ENST00000452226 TYRP1P17643 537 aa18.08■□□□□ 0.48
PDLIM2-214ENST00000452226 MAP4P27816 1152 aaKnown RBP18.08■□□□□ 0.48
PDLIM2-214ENST00000452226 SLC19A1P41440 591 aa18.08■□□□□ 0.48
PDLIM2-214ENST00000452226 GFERP55789 205 aa18.08■□□□□ 0.48
PDLIM2-214ENST00000452226 OLIG2Q13516 323 aa18.08■□□□□ 0.48
PDLIM2-214ENST00000452226 CCNG2Q16589 344 aa18.08■□□□□ 0.48
PDLIM2-214ENST00000452226 P3H1Q32P28 736 aa18.08■□□□□ 0.48
PDLIM2-214ENST00000452226 ATP13A5Q4VNC0 1218 aa18.08■□□□□ 0.48
PDLIM2-214ENST00000452226 DRICH1Q6PGQ1 229 aaPredicted RBP18.08■□□□□ 0.48
PDLIM2-214ENST00000452226 GDAP1Q8TB36 358 aa18.08■□□□□ 0.48
PDLIM2-214ENST00000452226 BLOC1S5Q8TDH9 187 aa18.08■□□□□ 0.48
PDLIM2-214ENST00000452226 ANP32BQ92688 251 aaKnown RBP18.08■□□□□ 0.48
PDLIM2-214ENST00000452226 VPS35Q96QK1 796 aa18.08■□□□□ 0.48
PDLIM2-214ENST00000452226 OGFRQ9NZT2 677 aa18.08■□□□□ 0.48
PDLIM2-214ENST00000452226 JRKLQ9Y4A0 524 aa18.08■□□□□ 0.48
PDLIM2-214ENST00000452226 SLC30A1Q9Y6M5 507 aa18.08■□□□□ 0.48
PDLIM2-214ENST00000452226 ZNF891A8MT65 544 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 POLR1CO15160 346 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 ZSCAN12O43309 604 aa18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 PPFIA2O75334 1257 aa18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 STK17BO94768 372 aa18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 C9P02748 559 aa18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 ANKRD34CP0C6C1 535 aa18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 AMD1P17707 334 aa18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 IDSP22304 550 aa18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 RPL10P27635 214 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 NFKB2Q00653 900 aa18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 TMEM115Q12893 351 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 ZDHHC20Q5W0Z9 365 aa18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 BORAQ6PGQ7 559 aa18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 ABRAXAS1Q6UWZ7 409 aa18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 TIPARPQ7Z3E1 657 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 GLT6D1Q7Z4J2 308 aa18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 TRAPPC5Q8IUR0 188 aa18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 KIAA1143Q96AT1 154 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 SLC45A3Q96JT2 553 aa18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 C9orf72Q96LT7 481 aa18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 TBL1YQ9BQ87 522 aa18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 APOL2Q9BQE5 337 aa18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 GPN2Q9H9Y4 310 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 IL26Q9NPH9 171 aa18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 GEMIN8Q9NWZ8 242 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 FEZ2Q9UHY8 353 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 ZKSCAN5Q9Y2L8 839 aa18.07■□□□□ 0.48
PDLIM2-214ENST00000452226 LOC101059948A0A1B0GTJ6 334 aa18.06■□□□□ 0.48
PDLIM2-214ENST00000452226 OR52A4PA6NMU1 304 aa18.06■□□□□ 0.48
PDLIM2-214ENST00000452226 CAPN5O15484 640 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms