RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 HSPA7P48741 367 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 ACAP2Q15057 778 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 ADGRD1Q6QNK2 874 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 EXOC3L1Q86VI1 746 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 CLYBLQ8N0X4 340 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 ZFP28Q8NHY6 868 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 CLIP3Q96DZ5 547 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 RAP2CQ9Y3L5 183 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 SLC2A6Q9UGQ3 507 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 BTRCQ9Y297 605 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 NDUFAF1Q9Y375 327 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 CASP8AP2Q9UKL3 1982 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 ARFGEF1Q9Y6D6 1849 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 ETV3P41162 512 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 ERFP50548 548 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 TSNQ15631 228 aaKnown RBP13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 HNRNPA1L2Q32P51 320 aaKnown RBP13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 RSPO2Q6UXX9 243 aaPredicted RBP13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 DNAJC14Q6Y2X3 702 aaPredicted RBP13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 C10orf107Q8IVU9 208 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 SLC22A12Q96S37 553 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 TDRD1Q9BXT4 1180 aaKnown RBP13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 MYO1GB0I1T2 1018 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 IFNA14P01570 189 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 RPL3P39023 403 aaKnown RBP13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 PTPN5P54829 565 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 SULT1C3Q6IMI6 304 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 MTDHQ86UE4 582 aaKnown RBP13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 SLC22A18Q96BI1 424 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 ALAS2P22557 587 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 CRHR1P34998 444 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 RPL38P63173 70 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 FOXM1Q08050 763 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 CLDN19Q8N6F1 224 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 CHST14Q8NCH0 376 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 WDR92Q96MX6 357 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 MTG2Q9H4K7 406 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 RC3H2Q9HBD1 1191 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 PCDH10Q9P2E7 1040 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 DRGXA6NNA5 263 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 ERAL1O75616 437 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 CYP7B1O75881 506 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 MRPL58Q14197 206 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 ICA1LQ8NDH6 482 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 OXNAD1Q96HP4 312 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 CNDP1Q96KN2 507 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 MCM3APO60318 1980 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 CCDC154A6NI56 674 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 ZSCAN9O15535 394 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 PAPSS2O95340 614 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 PRAMEF12O95522 483 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 HSD17B2P37059 387 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 TRAF2Q12933 501 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 ATP13A5Q4VNC0 1218 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 NAPRTQ6XQN6 538 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 HEATR4Q86WZ0 1026 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 DNAJC9Q8WXX5 260 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 IGLON5A6NGN9 336 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 EEF1B2P24534 225 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 KLF1Q13351 362 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 SMAD4Q13485 552 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 TJAP1Q5JTD0 557 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 NCEH1Q6PIU2 408 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 ZC3H14Q6PJT7 736 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 ZNF621Q6ZSS3 439 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 TRIM74Q86UV6 250 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 NXPE1Q8N323 547 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 USP29Q9HBJ7 922 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 ITM2CQ9NQX7 267 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 OSER1Q9NX31 292 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 KLHL28Q9NXS3 571 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 V9GYQ6 96 aa13.92□□□□□ -0.18
SMARCA4-204ENST00000444061 AXIN1O15169 862 aa13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 SLC35G6P0C7Q6 338 aa13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 HOXC8P31273 242 aa13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 SLC6A11P48066 632 aa13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 NRG1Q02297 640 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 CREB5Q02930 508 aa13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 COL13A1Q5TAT6 717 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 IPPKQ9H8X2 491 aa13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 OBP2AQ9NY56 170 aa13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 CCDC167Q9P0B6 97 aa13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 CCL26Q9Y258 94 aa13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 TTC36A6NLP5 189 aa13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 HDAC3O15379 428 aa13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 APBB3O95704 486 aa13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 ITGAXP20702 1163 aa13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 LAPTM5Q13571 262 aa13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 CCDC92Q53HC0 331 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 PAQR3Q6TCH7 311 aa13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 MAFAQ8NHW3 353 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 TFGQ92734 400 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 ARMC7Q9H6L4 198 aa13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 NLE1Q9NVX2 485 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 CITO14578 2027 aa13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 IGFBP6P24592 240 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 RPL10P27635 214 aaKnown RBP13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 TMEM115Q12893 351 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 ELOCQ15369 112 aa13.91□□□□□ -0.18
SMARCA4-204ENST00000444061 CYP2U1Q7Z449 544 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms