RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 C12orf54Q6X4T0 127 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 DNAAF5Q86Y56 855 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 FAM20CQ8IXL6 584 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 MAPK1IP1LQ8NDC0 245 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 TEKT4Q8WW24 435 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 FAXDC2Q96IV6 333 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 NSMCE3Q96MG7 304 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 ZYG11BQ9C0D3 744 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 POT1Q9NUX5 634 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 IFT80Q9P2H3 777 aaPredicted RBP10.76□□□□□ -0.69
RTN4-211ENST00000438462 B4GALT6Q9UBX8 382 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 DNAJC16Q9Y2G8 782 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 MRPS2Q9Y399 296 aaKnown RBP10.76□□□□□ -0.69
RTN4-211ENST00000438462 HS3ST3B1Q9Y662 390 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 SEC16AO15027 2179 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 USF3Q68DE3 2245 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 A0A087X1B8 175 aa10.75□□□□□ -0.69
RTN4-211ENST00000438462 E5RJQ4 531 aa10.75□□□□□ -0.69
RTN4-211ENST00000438462 TLX2O43763 284 aaPredicted RBP10.75□□□□□ -0.69
RTN4-211ENST00000438462 ALX3O95076 343 aa10.75□□□□□ -0.69
RTN4-211ENST00000438462 WDPCPO95876 746 aa10.75□□□□□ -0.69
RTN4-211ENST00000438462 CALCAP01258 141 aa10.75□□□□□ -0.69
RTN4-211ENST00000438462 CD63P08962 238 aa10.75□□□□□ -0.69
RTN4-211ENST00000438462 FILIP1LQ4L180 1135 aa10.75□□□□□ -0.69
RTN4-211ENST00000438462 OTUD1Q5VV17 481 aaPredicted RBP10.75□□□□□ -0.69
RTN4-211ENST00000438462 MRPL14Q6P1L8 145 aaKnown RBP10.75□□□□□ -0.69
RTN4-211ENST00000438462 FBXO38Q6PIJ6 1188 aa10.75□□□□□ -0.69
RTN4-211ENST00000438462 HSD11B1LQ7Z5J1 315 aa10.75□□□□□ -0.69
RTN4-211ENST00000438462 TMTC1Q8IUR5 882 aa10.75□□□□□ -0.69
RTN4-211ENST00000438462 SIRT6Q8N6T7 355 aa10.75□□□□□ -0.69
RTN4-211ENST00000438462 PAF1Q8N7H5 531 aa10.75□□□□□ -0.69
RTN4-211ENST00000438462 BRIX1Q8TDN6 353 aaKnown RBP10.75□□□□□ -0.69
RTN4-211ENST00000438462 FAM222BQ8WU58 562 aa10.75□□□□□ -0.69
RTN4-211ENST00000438462 ZMYND19Q96E35 227 aaPredicted RBP10.75□□□□□ -0.69
RTN4-211ENST00000438462 SLC2A13Q96QE2 648 aa10.75□□□□□ -0.69
RTN4-211ENST00000438462 CD180Q99467 661 aa10.75□□□□□ -0.69
RTN4-211ENST00000438462 NOL6Q9H6R4 1146 aaKnown RBP10.75□□□□□ -0.69
RTN4-211ENST00000438462 SLC40A1Q9NP59 571 aa10.75□□□□□ -0.69
RTN4-211ENST00000438462 PIGVQ9NUD9 493 aa10.75□□□□□ -0.69
RTN4-211ENST00000438462 ARMCX1Q9P291 453 aa10.75□□□□□ -0.69
RTN4-211ENST00000438462 HRH3Q9Y5N1 445 aa10.75□□□□□ -0.69
RTN4-211ENST00000438462 PHF3Q92576 2039 aaKnown RBP10.75□□□□□ -0.69
RTN4-211ENST00000438462 E7EQ34 232 aa10.74□□□□□ -0.69
RTN4-211ENST00000438462 DNAJB6O75190 326 aa10.74□□□□□ -0.69
RTN4-211ENST00000438462 TP53P04637 393 aaPredicted RBP10.74□□□□□ -0.69
RTN4-211ENST00000438462 UQCRHP07919 91 aa10.74□□□□□ -0.69
RTN4-211ENST00000438462 TNFAIP3P21580 790 aa10.74□□□□□ -0.69
RTN4-211ENST00000438462 ARSEP51690 589 aa10.74□□□□□ -0.69
RTN4-211ENST00000438462 PDCD2Q16342 344 aaPredicted RBP10.74□□□□□ -0.69
RTN4-211ENST00000438462 MCTP1Q6DN14 999 aa10.74□□□□□ -0.69
RTN4-211ENST00000438462 SMYD5Q6GMV2 418 aa10.74□□□□□ -0.69
RTN4-211ENST00000438462 KIAA0930Q6ICG6 404 aaPredicted RBP10.74□□□□□ -0.69
RTN4-211ENST00000438462 HIBCHQ6NVY1 386 aaPredicted RBP10.74□□□□□ -0.69
RTN4-211ENST00000438462 ADAMTSL4Q6UY14 1074 aa10.74□□□□□ -0.69
RTN4-211ENST00000438462 Q6ZVL8 140 aa10.74□□□□□ -0.69
RTN4-211ENST00000438462 SIAH3Q8IW03 269 aa10.74□□□□□ -0.69
RTN4-211ENST00000438462 FAM184AQ8NB25 1140 aa10.74□□□□□ -0.69
RTN4-211ENST00000438462 RNF25Q96BH1 459 aaPredicted RBP10.74□□□□□ -0.69
RTN4-211ENST00000438462 PPM1MQ96MI6 270 aa10.74□□□□□ -0.69
RTN4-211ENST00000438462 PIP5K1AQ99755 562 aa10.74□□□□□ -0.69
RTN4-211ENST00000438462 SARGQ9BW04 601 aa10.74□□□□□ -0.69
RTN4-211ENST00000438462 THAP9Q9H5L6 903 aa10.74□□□□□ -0.69
RTN4-211ENST00000438462 RETREG1Q9H6L5 497 aa10.74□□□□□ -0.69
RTN4-211ENST00000438462 DMAC2Q9NW81 257 aa10.74□□□□□ -0.69
RTN4-211ENST00000438462 KCTD5Q9NXV2 234 aa10.74□□□□□ -0.69
RTN4-211ENST00000438462 KIAA1257Q9ULG3 409 aa10.74□□□□□ -0.69
RTN4-211ENST00000438462 TENM1Q9UKZ4 2725 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 OR5H15A6NDH6 313 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 MBD3L4A6NDZ8 208 aaPredicted RBP10.73□□□□□ -0.69
RTN4-211ENST00000438462 MBD3L5A6NJ08 208 aaPredicted RBP10.73□□□□□ -0.69
RTN4-211ENST00000438462 OR52A4PA6NMU1 304 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 GRAP2O75791 330 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 USP1O94782 785 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 ATP1A1P05023 1023 aaKnown RBP10.73□□□□□ -0.69
RTN4-211ENST00000438462 HBQ1P09105 142 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 SERPINA4P29622 427 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 STAT6P42226 847 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 ACADSBP45954 432 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 NUP107P57740 925 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 CUL2Q13617 745 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 DAZAP2Q15038 168 aaPredicted RBP10.73□□□□□ -0.69
RTN4-211ENST00000438462 CNGA2Q16280 664 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 KNOP1Q1ED39 458 aaKnown RBP10.73□□□□□ -0.69
RTN4-211ENST00000438462 MIDNQ504T8 468 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 ZNF766Q5HY98 468 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 ATG9BQ674R7 924 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 KAZNQ674X7 775 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 PHLDB2Q86SQ0 1253 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 MCUQ8NE86 351 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 GOLGA5Q8TBA6 731 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 FAM57AQ8TBR7 257 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 CCDC110Q8TBZ0 833 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 CASKIN2Q8WXE0 1202 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 PSMF1Q92530 271 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 ECHDC3Q96DC8 303 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 MED15Q96RN5 788 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 WDCPQ9H6R7 721 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 RMI1Q9H9A7 625 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 ZNF160Q9HCG1 818 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 TMEM8AQ9HCN3 771 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms