RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 NIPAL4Q0D2K0 466 aa10.24□□□□□ -0.77
CPNE1-214ENST00000435747 NFATC2Q13469 925 aa10.24□□□□□ -0.77
CPNE1-214ENST00000435747 KRT81Q14533 505 aa10.24□□□□□ -0.77
CPNE1-214ENST00000435747 HADHQ16836 314 aaKnown RBP10.24□□□□□ -0.77
CPNE1-214ENST00000435747 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.24□□□□□ -0.77
CPNE1-214ENST00000435747 CFAP58Q5T655 872 aa10.24□□□□□ -0.77
CPNE1-214ENST00000435747 FAM199XQ6PEV8 388 aaPredicted RBP10.24□□□□□ -0.77
CPNE1-214ENST00000435747 RFLNAQ6ZTI6 216 aa10.24□□□□□ -0.77
CPNE1-214ENST00000435747 MED25Q71SY5 747 aa10.24□□□□□ -0.77
CPNE1-214ENST00000435747 PPP1R3BQ86XI6 285 aa10.24□□□□□ -0.77
CPNE1-214ENST00000435747 VSIG1Q86XK7 387 aa10.24□□□□□ -0.77
CPNE1-214ENST00000435747 PLXDC1Q8IUK5 500 aa10.24□□□□□ -0.77
CPNE1-214ENST00000435747 CNTD1Q8N815 330 aa10.24□□□□□ -0.77
CPNE1-214ENST00000435747 TMEM102Q8N9M5 508 aaPredicted RBP10.24□□□□□ -0.77
CPNE1-214ENST00000435747 SLC35G2Q8TBE7 412 aa10.24□□□□□ -0.77
CPNE1-214ENST00000435747 LRRN4Q8WUT4 740 aa10.24□□□□□ -0.77
CPNE1-214ENST00000435747 RELTQ969Z4 430 aa10.24□□□□□ -0.77
CPNE1-214ENST00000435747 TDRD1Q9BXT4 1180 aaKnown RBP10.24□□□□□ -0.77
CPNE1-214ENST00000435747 FRMD8Q9BZ67 464 aaPredicted RBP10.24□□□□□ -0.77
CPNE1-214ENST00000435747 MCCC2Q9HCC0 563 aa10.24□□□□□ -0.77
CPNE1-214ENST00000435747 PHPT1Q9NRX4 125 aaPredicted RBP10.24□□□□□ -0.77
CPNE1-214ENST00000435747 DTLQ9NZJ0 730 aa10.24□□□□□ -0.77
CPNE1-214ENST00000435747 AMACRQ9UHK6 382 aa10.24□□□□□ -0.77
CPNE1-214ENST00000435747 LCMT1Q9UIC8 334 aa10.24□□□□□ -0.77
CPNE1-214ENST00000435747 PLEKHM1Q9Y4G2 1056 aa10.24□□□□□ -0.77
CPNE1-214ENST00000435747 A0A0J9YYE9 177 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 TRBC1P01850 177 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 ALPPP05187 535 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 HLA-DQB2P05538 268 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 TPM3P06753 285 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 FGF5P12034 268 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 FECHP22830 423 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 KDELR1P24390 212 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 ADCY8P40145 1251 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 EPHA4P54764 986 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 DSC2Q02487 901 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 PTSQ03393 145 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 LAMB3Q13751 1172 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 ACOX1Q15067 660 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 IFI16Q16666 785 aaKnown RBP10.23□□□□□ -0.77
CPNE1-214ENST00000435747 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.23□□□□□ -0.77
CPNE1-214ENST00000435747 ARMC12Q5T9G4 340 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 SLC9A4Q6AI14 798 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 Q6ZVL8 140 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 CUZD1Q86UP6 607 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 NLRP8Q86W28 1048 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 TGIF2LYQ8IUE0 185 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 SFRP1Q8N474 314 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 ZADH2Q8N4Q0 377 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 ADAMTS17Q8TE56 1095 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 CTNNBL1Q8WYA6 563 aaPredicted RBP10.23□□□□□ -0.77
CPNE1-214ENST00000435747 TM9SF4Q92544 642 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 SH3KBP1Q96B97 665 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 NUS1Q96E22 293 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 SCARF2Q96GP6 870 aaPredicted RBP10.23□□□□□ -0.77
CPNE1-214ENST00000435747 OLFM3Q96PB7 478 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 RNF157Q96PX1 679 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 LYSMD1Q96S90 227 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 POLR1EQ9GZS1 481 aaKnown RBP10.23□□□□□ -0.77
CPNE1-214ENST00000435747 EPB41L1Q9H4G0 881 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 NHEJ1Q9H9Q4 299 aaPredicted RBP10.23□□□□□ -0.77
CPNE1-214ENST00000435747 NT5MQ9NPB1 228 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 SPTLC3Q9NUV7 552 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 SLC17A4Q9Y2C5 497 aa10.23□□□□□ -0.77
CPNE1-214ENST00000435747 SPTBP11277 2137 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 VPS13CQ709C8 3753 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 CBFA2T2O43439 604 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 CYP2A6P11509 494 aaPredicted RBP10.22□□□□□ -0.77
CPNE1-214ENST00000435747 KLK2P20151 261 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 ARHGAP25P42331 645 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 GFERP55789 205 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 CDK3Q00526 305 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 PDE1BQ01064 536 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 LTBQ06643 244 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 PPIDQ08752 370 aaKnown RBP10.22□□□□□ -0.77
CPNE1-214ENST00000435747 LLGL1Q15334 1064 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 TAZQ16635 292 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 LRRC38Q5VT99 294 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 LRRC66Q68CR7 880 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 TIGD7Q6NT04 549 aaPredicted RBP10.22□□□□□ -0.77
CPNE1-214ENST00000435747 CYB5D1Q6P9G0 228 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 SARM1Q6SZW1 724 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 IGFL3Q6UXB1 125 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 Q6ZS92 163 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 RAVER1Q8IY67 606 aaKnown RBP10.22□□□□□ -0.77
CPNE1-214ENST00000435747 BBS5Q8N3I7 341 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 KCTD6Q8NC69 237 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 CHDHQ8NE62 594 aaPredicted RBP10.22□□□□□ -0.77
CPNE1-214ENST00000435747 GRHL3Q8TE85 626 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 TADA1Q96BN2 335 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 EID2BQ96D98 161 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 SGSM3Q96HU1 749 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 C9orf72Q96LT7 481 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 TRIB3Q96RU7 358 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 WDR24Q96S15 920 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 TSPY26PQ9H489 355 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 AKIRIN1Q9H9L7 192 aaPredicted RBP10.22□□□□□ -0.77
CPNE1-214ENST00000435747 SARS2Q9NP81 518 aaKnown RBP10.22□□□□□ -0.77
CPNE1-214ENST00000435747 KCTD5Q9NXV2 234 aa10.22□□□□□ -0.77
CPNE1-214ENST00000435747 SNX7Q9UNH6 387 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms