RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 TMEM63AO94886 807 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 LDLRP01130 860 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 IGHEP01854 428 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 SLC4A1P02730 911 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 C9P02748 559 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 FUCA1P04066 466 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 CYP1A1P04798 512 aaPredicted RBP7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 RNF224P0DH78 156 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 FGF5P12034 268 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 GM2AP17900 193 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 TNNT3P45378 269 aaPredicted RBP7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 POLR2FP61218 127 aaKnown RBP7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 MAXP61244 160 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 SLC10A7Q0GE19 358 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 TRAF2Q12933 501 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 CLEC16AQ2KHT3 1053 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 ZXDCQ2QGD7 858 aaPredicted RBP7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 DNTTIP2Q5QJE6 756 aaKnown RBP7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 ERMARDQ5T6L9 678 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 VWA5B1Q5TIE3 1220 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 C1QL3Q5VWW1 255 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 HGSNATQ68CP4 663 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 MED25Q71SY5 747 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 TMEM102Q8N9M5 508 aaPredicted RBP7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 GDAP1Q8TB36 358 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 ANP32BQ92688 251 aaKnown RBP7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 N4BP2L2Q92802 583 aaPredicted RBP7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 SCAMP4Q969E2 229 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 VOPP1Q96AW1 172 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 CLIP3Q96DZ5 547 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 BTBD6Q96KE9 485 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 TTC25Q96NG3 672 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 FCRL4Q96PJ5 515 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 MLPHQ9BV36 600 aaPredicted RBP7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 SPATA16Q9BXB7 569 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 POLR1EQ9GZS1 481 aaKnown RBP7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 OR2AG1Q9H205 316 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 CARD9Q9H257 536 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 NOD2Q9HC29 1040 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 NT5MQ9NPB1 228 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 NLRC4Q9NPP4 1024 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 RAD18Q9NS91 495 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 FAM207AQ9NSI2 230 aaPredicted RBP7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 PCSK1NQ9UHG2 260 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 NOCTQ9UK39 431 aaKnown RBP7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 DNAJC16Q9Y2G8 782 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 COPG1Q9Y678 874 aaKnown RBP7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 MED13Q9UHV7 2174 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 GPR89AB7ZAQ6 455 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 PRSS44E7EML9 344 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 PEX12O00623 359 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 KMOO15229 486 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 SLC25A14O95258 325 aaPredicted RBP7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 EML2O95834 649 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 GPR89BP0CG08 455 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 NELFEP18615 380 aaKnown RBP7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 CYP2A7P20853 494 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 IDSP22304 550 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 VAV2P52735 878 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 GSCP56915 257 aaPredicted RBP7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 FMO1Q01740 532 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 RAPSNQ13702 412 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 ANKRD20A8PQ5CZ79 823 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 ARTNQ5T4W7 220 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 ARHGAP36Q6ZRI8 547 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 TECPR1Q7Z6L1 1165 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 LRRTM4Q86VH4 590 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 KMT5CQ86Y97 462 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 PHF13Q86YI8 300 aaPredicted RBP7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 ZADH2Q8N4Q0 377 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 LPCAT1Q8NF37 534 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 NEK11Q8NG66 645 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 OR8K5Q8NH50 307 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 CPT1BQ92523 772 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 RSC1A1Q92681 617 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 ZNF514Q96K75 400 aaPredicted RBP7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 IP6K3Q96PC2 410 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 PLEKHG4BQ96PX9 1271 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 MCCC1Q96RQ3 725 aaPredicted RBP7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 C17orf62Q9BQA9 187 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 MGME1Q9BQP7 344 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 SNRNP25Q9BV90 132 aaKnown RBP7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 ZCCHC2Q9C0B9 1178 aaKnown RBP7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 PHACTR1Q9C0D0 580 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 FAM83DQ9H4H8 585 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 FGF21Q9NSA1 209 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 PARVAQ9NVD7 372 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 GPN3Q9UHW5 284 aaPredicted RBP7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 ENTPD4Q9Y227 616 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 B3GNT3Q9Y2A9 372 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 ST14Q9Y5Y6 855 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 FBN2P35556 2912 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 SHANK1Q9Y566 2161 aa7.7□□□□□ -1.18
ECHDC1-207ENST00000430841 A0A0J9YYE9 177 aa7.69□□□□□ -1.18
ECHDC1-207ENST00000430841 HEATR9A2RTY3 570 aa7.69□□□□□ -1.18
ECHDC1-207ENST00000430841 TLCD2A6NGC4 264 aa7.69□□□□□ -1.18
ECHDC1-207ENST00000430841 EIF1AYO14602 144 aaKnown RBP7.69□□□□□ -1.18
ECHDC1-207ENST00000430841 KRT86O43790 486 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms