RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 CCDC162PA2VCL2 907 aa14.6□□□□□ -0.07
RTN4-210ENST00000427710 MROH6A6NGR9 719 aa14.6□□□□□ -0.07
RTN4-210ENST00000427710 ERI2A8K979 691 aaKnown RBP14.6□□□□□ -0.07
RTN4-210ENST00000427710 A8MU76 341 aa14.6□□□□□ -0.07
RTN4-210ENST00000427710 KIR2DS3K7RE56 304 aa14.6□□□□□ -0.07
RTN4-210ENST00000427710 VIPP01282 170 aa14.6□□□□□ -0.07
RTN4-210ENST00000427710 SLC2A4P14672 509 aa14.6□□□□□ -0.07
RTN4-210ENST00000427710 TYRP1P17643 537 aa14.6□□□□□ -0.07
RTN4-210ENST00000427710 SESN2P58004 480 aaPredicted RBP14.6□□□□□ -0.07
RTN4-210ENST00000427710 CRADDP78560 199 aa14.6□□□□□ -0.07
RTN4-210ENST00000427710 KIR2DS5Q14953 304 aa14.6□□□□□ -0.07
RTN4-210ENST00000427710 COL28A1Q2UY09 1125 aa14.6□□□□□ -0.07
RTN4-210ENST00000427710 JAMLQ86YT9 394 aa14.6□□□□□ -0.07
RTN4-210ENST00000427710 GPR150Q8NGU9 434 aa14.6□□□□□ -0.07
RTN4-210ENST00000427710 NCSTNQ92542 709 aa14.6□□□□□ -0.07
RTN4-210ENST00000427710 MAGOHBQ96A72 148 aaKnown RBP14.6□□□□□ -0.07
RTN4-210ENST00000427710 ULK4Q96C45 1275 aa14.6□□□□□ -0.07
RTN4-210ENST00000427710 GRAMD1AQ96CP6 724 aa14.6□□□□□ -0.07
RTN4-210ENST00000427710 DCUN1D1Q96GG9 259 aa14.6□□□□□ -0.07
RTN4-210ENST00000427710 SLC46A1Q96NT5 459 aa14.6□□□□□ -0.07
RTN4-210ENST00000427710 OSBPL9Q96SU4 736 aa14.6□□□□□ -0.07
RTN4-210ENST00000427710 STN1Q9H668 368 aaKnown RBP14.6□□□□□ -0.07
RTN4-210ENST00000427710 ZDHHC3Q9NYG2 299 aa14.6□□□□□ -0.07
RTN4-210ENST00000427710 PCDHGA8Q9Y5G5 932 aa14.6□□□□□ -0.07
RTN4-210ENST00000427710 CFAP20Q9Y6A4 193 aaKnown RBP14.6□□□□□ -0.07
RTN4-210ENST00000427710 OR5K4A6NMS3 321 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 AGAP14A8MT82 685 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 TMX2-CTNND1H3BSU7 103 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 PLD2O14939 933 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 KIF5CO60282 957 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 DXOO77932 396 aaKnown RBP14.59□□□□□ -0.07
RTN4-210ENST00000427710 POLBP06746 335 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 VCLP18206 1134 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 XRCC1P18887 633 aaPredicted RBP14.59□□□□□ -0.07
RTN4-210ENST00000427710 MSNP26038 577 aaKnown RBP14.59□□□□□ -0.07
RTN4-210ENST00000427710 LIMK2P53671 638 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 MAPK10P53779 464 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 DBN1Q16643 649 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 TSTD2Q5T7W7 516 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 DUS1LQ6P1R4 473 aaKnown RBP14.59□□□□□ -0.07
RTN4-210ENST00000427710 ABRAXAS1Q6UWZ7 409 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 XKR5Q6UX68 686 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 OR13J1Q8NGT2 312 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 OR10G6Q8NH81 332 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 SNIP1Q8TAD8 396 aaKnown RBP14.59□□□□□ -0.07
RTN4-210ENST00000427710 HDAC10Q969S8 669 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 CXorf40BQ96DE9 158 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 ZNF578Q96N58 590 aaPredicted RBP14.59□□□□□ -0.07
RTN4-210ENST00000427710 COPS8Q99627 209 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 WWP1Q9H0M0 922 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 OGFRQ9NZT2 677 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 KLHL3Q9UH77 587 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 PRSS21Q9Y6M0 314 aa14.59□□□□□ -0.07
RTN4-210ENST00000427710 TRBV5-4A0A0C4DH59 114 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 H7C0S8 307 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 ZW10O43264 779 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 DUX1O43812 170 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 GAS8O95995 478 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 GOT2P00505 430 aaKnown RBP14.58□□□□□ -0.08
RTN4-210ENST00000427710 KRT14P02533 472 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 JMJD7P0C870 316 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 CCL4P13236 92 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 ATP1B2P14415 290 aaPredicted RBP14.58□□□□□ -0.08
RTN4-210ENST00000427710 ACRV1P26436 265 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 FOXN2P32314 431 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 COILP38432 576 aaPredicted RBP14.58□□□□□ -0.08
RTN4-210ENST00000427710 GPLD1P80108 840 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 CACNG1Q06432 222 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 DMPKQ09013 629 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 RPE65Q16518 533 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 SKIDA1Q1XH10 827 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 BCL7AQ4VC05 210 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 AGAP9Q5VTM2 703 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 TMEM26Q6ZUK4 368 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 CFAP206Q8IYR0 622 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 LSMEM2Q8N112 164 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 SH3KBP1Q96B97 665 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 THSD1Q9NS62 852 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 WDR70Q9NW82 654 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 TCAF1Q9Y4C2 921 aa14.58□□□□□ -0.08
RTN4-210ENST00000427710 DNMT3AQ9Y6K1 912 aaPredicted RBP14.58□□□□□ -0.08
RTN4-210ENST00000427710 A0A087WV48 116 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 HEATR9A2RTY3 570 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 MGAT4DA6NG13 374 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 CDRT15L2A8MXV6 281 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 PGRMC1O00264 195 aaKnown RBP14.57□□□□□ -0.08
RTN4-210ENST00000427710 THRAP10827 490 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 RALBP11234 206 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 ADRA1DP25100 572 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 MGAT1P26572 445 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 SLC5A2P31639 672 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 GFERP55789 205 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 PCBP4P57723 403 aaKnown RBP14.57□□□□□ -0.08
RTN4-210ENST00000427710 ERVPABLB-1P60509 514 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 GPS1Q13098 491 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 GPR18Q14330 331 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 GPR33Q49SQ1 333 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 ANKRD22Q5VYY1 191 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 METRNLQ641Q3 311 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 TMEM71Q6P5X7 295 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms