RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 DET1Q7L5Y6 550 aa26.12■■□□□ 1.77
LDB1-202ENST00000425280 PARP9Q8IXQ6 854 aa26.12■■□□□ 1.77
LDB1-202ENST00000425280 CPSF7Q8N684 471 aaKnown RBP26.12■■□□□ 1.77
LDB1-202ENST00000425280 RBM15BQ8NDT2 890 aaKnown RBP26.12■■□□□ 1.77
LDB1-202ENST00000425280 ZDHHC4Q9NPG8 344 aa26.12■■□□□ 1.77
LDB1-202ENST00000425280 SEMA4BQ9NPR2 832 aaPredicted RBP26.12■■□□□ 1.77
LDB1-202ENST00000425280 THAP10Q9P2Z0 257 aaPredicted RBP26.12■■□□□ 1.77
LDB1-202ENST00000425280 ADAMTS6Q9UKP5 1117 aa26.12■■□□□ 1.77
LDB1-202ENST00000425280 G3BP2Q9UN86 482 aaKnown RBP26.12■■□□□ 1.77
LDB1-202ENST00000425280 FADS2P1A8MWK0 482 aa26.11■■□□□ 1.77
LDB1-202ENST00000425280 ATP1B2P14415 290 aaPredicted RBP26.11■■□□□ 1.77
LDB1-202ENST00000425280 AKT1P31749 480 aa26.11■■□□□ 1.77
LDB1-202ENST00000425280 CCR7P32248 378 aa26.11■■□□□ 1.77
LDB1-202ENST00000425280 EIF2DP41214 584 aaKnown RBP26.11■■□□□ 1.77
LDB1-202ENST00000425280 NAA20P61599 178 aa26.11■■□□□ 1.77
LDB1-202ENST00000425280 ACOX1Q15067 660 aa26.11■■□□□ 1.77
LDB1-202ENST00000425280 CRY1Q16526 586 aa26.11■■□□□ 1.77
LDB1-202ENST00000425280 TTLL9Q3SXZ7 439 aa26.11■■□□□ 1.77
LDB1-202ENST00000425280 TMPRSS6Q8IU80 811 aa26.11■■□□□ 1.77
LDB1-202ENST00000425280 TDHQ8IZJ6 230 aa26.11■■□□□ 1.77
LDB1-202ENST00000425280 CEP70Q8NHQ1 597 aa26.11■■□□□ 1.77
LDB1-202ENST00000425280 ACTRT2Q8TDY3 377 aa26.11■■□□□ 1.77
LDB1-202ENST00000425280 AGAP11Q8TF27 550 aa26.11■■□□□ 1.77
LDB1-202ENST00000425280 CATSPER2Q96P56 530 aa26.11■■□□□ 1.77
LDB1-202ENST00000425280 ZSCAN5AQ9BUG6 496 aa26.11■■□□□ 1.77
LDB1-202ENST00000425280 WRAP53Q9BUR4 548 aaKnown RBP26.11■■□□□ 1.77
LDB1-202ENST00000425280 ASB1Q9Y576 335 aa26.11■■□□□ 1.77
LDB1-202ENST00000425280 SUSD6Q92537 303 aa26.11■■□□□ 1.77
LDB1-202ENST00000425280 ESAMQ96AP7 390 aa26.11■■□□□ 1.77
LDB1-202ENST00000425280 DCUN1D1Q96GG9 259 aa26.11■■□□□ 1.77
LDB1-202ENST00000425280 FAM126AQ9BYI3 521 aaPredicted RBP26.11■■□□□ 1.77
LDB1-202ENST00000425280 ZBTB26Q9HCK0 441 aa26.11■■□□□ 1.77
LDB1-202ENST00000425280 EIF2B4Q9UI10 523 aaKnown RBP26.11■■□□□ 1.77
LDB1-202ENST00000425280 A0A1B0GTL3 188 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 MTX2O75431 263 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 PRDX6P30041 224 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 ZNF284Q2VY69 593 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 FBXL19Q6PCT2 694 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 CMTM5Q96DZ9 223 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 ACOX2Q99424 681 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 SUN2Q9UH99 717 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 OARD1Q9Y530 152 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 PSMD11O00231 422 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 PLK4O00444 970 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 AZIN1O14977 448 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 CBSLP0DN79 551 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 AOAHP28039 575 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 CBSP35520 551 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 FOXA1P55317 472 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 KHDC1Q4VXA5 237 aaKnown RBP26.1■■□□□ 1.77
LDB1-202ENST00000425280 EGFLAMQ63HQ2 1017 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 KANK2Q63ZY3 851 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 FAM13CQ8NE31 585 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 DDHD1Q8NEL9 900 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 MARK4Q96L34 752 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 RIPOR3Q96MK2 946 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 DNAJC15Q9Y5T4 150 aa26.1■■□□□ 1.77
LDB1-202ENST00000425280 E2F3O00716 465 aa26.09■■□□□ 1.77
LDB1-202ENST00000425280 RAD51BO15315 384 aa26.09■■□□□ 1.77
LDB1-202ENST00000425280 FFAR2O15552 330 aa26.09■■□□□ 1.77
LDB1-202ENST00000425280 GRIA2P42262 883 aa26.09■■□□□ 1.77
LDB1-202ENST00000425280 COPAP53621 1224 aa26.09■■□□□ 1.77
LDB1-202ENST00000425280 RIPK1Q13546 671 aa26.09■■□□□ 1.77
LDB1-202ENST00000425280 ITPRIPL2Q3MIP1 535 aa26.09■■□□□ 1.77
LDB1-202ENST00000425280 NRSN1Q8IZ57 195 aa26.09■■□□□ 1.77
LDB1-202ENST00000425280 PELI3Q8N2H9 469 aa26.09■■□□□ 1.77
LDB1-202ENST00000425280 COQ10AQ96MF6 247 aa26.09■■□□□ 1.77
LDB1-202ENST00000425280 KCNA7Q96RP8 456 aa26.09■■□□□ 1.77
LDB1-202ENST00000425280 TRMT61BQ9BVS5 477 aaKnown RBP26.09■■□□□ 1.77
LDB1-202ENST00000425280 PRSS16Q9NQE7 514 aa26.09■■□□□ 1.77
LDB1-202ENST00000425280 MEI4A8MW99 385 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 H0Y858 1186 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 ARNTLO00327 626 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 WNT9AO14904 365 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 COX4I1P13073 169 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 PIK3R1P27986 724 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 HNRNPH1P31943 449 aaKnown RBP26.08■■□□□ 1.77
LDB1-202ENST00000425280 BMP8BP34820 402 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 C18orf21Q32NC0 220 aaPredicted RBP26.08■■□□□ 1.77
LDB1-202ENST00000425280 PDPRQ8NCN5 879 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 BTN2A2Q8WVV5 523 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 DLG3Q92796 817 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 PPP1R16AQ96I34 528 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 HGH1Q9BTY7 390 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 C1orf21Q9H246 121 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 CACNA2D2Q9NY47 1150 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 CFAP99D6REC4 459 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 AREL1O15033 823 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 SGTAO43765 313 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 ATP6V1G2O95670 118 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 S100BP04271 92 aaPredicted RBP26.08■■□□□ 1.77
LDB1-202ENST00000425280 EPHX1P07099 455 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 ADRB3P13945 408 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 MNAT1P51948 309 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 ELP6Q0PNE2 266 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 PHKG1Q16816 387 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 EP400NLQ6ZTU2 488 aa26.08■■□□□ 1.77
LDB1-202ENST00000425280 MMAAQ8IVH4 418 aaKnown RBP26.08■■□□□ 1.77
LDB1-202ENST00000425280 SUGP1Q8IWZ8 645 aaKnown RBP26.08■■□□□ 1.77
LDB1-202ENST00000425280 MCUR1Q96AQ8 359 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms