RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 FOXN2P32314 431 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 CSF2RBP32927 897 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 HALP42357 657 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 LSSP48449 732 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 FNTAP49354 379 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 CRADDP78560 199 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 GPLD1P80108 840 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 KCNJ11Q14654 390 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 DBN1Q16643 649 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 AGAP9Q5VTM2 703 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 AFTPHQ6ULP2 937 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 ABRAXAS1Q6UWZ7 409 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 WASH2PQ6VEQ5 465 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 ZNF534Q76KX8 674 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 NLRP9Q7RTR0 991 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 SLITRK4Q8IW52 837 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 OR10G6Q8NH81 332 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 WDR36Q8NI36 951 aaKnown RBP21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 GRK7Q8WTQ7 553 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 HDAC10Q969S8 669 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 CAPZA3Q96KX2 299 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 ZNF778Q96MU6 729 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 SEMA6CQ9H3T2 930 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 WASH6PQ9NQA3 447 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 BFARQ9NZS9 450 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 ZNF624Q9P2J8 865 aaPredicted RBP21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 RIMKLBQ9ULI2 386 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 PSMD13Q9UNM6 376 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 WDR37Q9Y2I8 494 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 RAXQ9Y2V3 346 aa21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 ANKRD11Q6UB99 2663 aaPredicted RBP21.92■■□□□ 1.1
PTCHD3P2-201ENST00000424937 IGLV3-16A0A075B6K0 115 aa21.91■■□□□ 1.1
PTCHD3P2-201ENST00000424937 MGAT4DA6NG13 374 aa21.91■■□□□ 1.1
PTCHD3P2-201ENST00000424937 SRRM3A6NNA2 597 aaPredicted RBP21.91■■□□□ 1.1
PTCHD3P2-201ENST00000424937 AP3B1O00203 1094 aa21.91■■□□□ 1.1
PTCHD3P2-201ENST00000424937 DUX1O43812 170 aa21.91■■□□□ 1.1
PTCHD3P2-201ENST00000424937 VIPP01282 170 aa21.91■■□□□ 1.1
PTCHD3P2-201ENST00000424937 SLC19A1P41440 591 aa21.91■■□□□ 1.1
PTCHD3P2-201ENST00000424937 MAPK9P45984 424 aa21.91■■□□□ 1.1
PTCHD3P2-201ENST00000424937 PRLHRP49683 370 aa21.91■■□□□ 1.1
PTCHD3P2-201ENST00000424937 PRAMEP78395 509 aa21.91■■□□□ 1.1
PTCHD3P2-201ENST00000424937 CDK16Q00536 496 aa21.91■■□□□ 1.1
PTCHD3P2-201ENST00000424937 CLPPQ16740 277 aaPredicted RBP21.91■■□□□ 1.1
PTCHD3P2-201ENST00000424937 PCID2Q5JVF3 399 aa21.91■■□□□ 1.1
PTCHD3P2-201ENST00000424937 OR2L2Q8NH16 312 aa21.91■■□□□ 1.1
PTCHD3P2-201ENST00000424937 CXorf40BQ96DE9 158 aa21.91■■□□□ 1.1
PTCHD3P2-201ENST00000424937 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.91■■□□□ 1.1
PTCHD3P2-201ENST00000424937 IL22Q9GZX6 179 aa21.91■■□□□ 1.1
PTCHD3P2-201ENST00000424937 POT1Q9NUX5 634 aa21.91■■□□□ 1.1
PTCHD3P2-201ENST00000424937 KMT2BQ9UMN6 2715 aaPredicted RBP21.91■■□□□ 1.1
PTCHD3P2-201ENST00000424937 URB1O60287 2271 aaKnown RBP21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 CTAGE9A4FU28 777 aa21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 LILRA5A6NI73 299 aa21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 GOT2P00505 430 aaKnown RBP21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 XRCC1P18887 633 aaPredicted RBP21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 MGAT1P26572 445 aa21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 EPHA4P54764 986 aa21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 ACVR1Q04771 509 aa21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 ZFP36L1Q07352 338 aaKnown RBP21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 CLCA4Q14CN2 919 aa21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 TBC1D25Q3MII6 688 aa21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 PAPD7Q5XG87 772 aaKnown RBP21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 LRRC8BQ6P9F7 803 aa21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 RAB11FIP2Q7L804 512 aa21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 LSMEM2Q8N112 164 aa21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 OR6P1Q8NGX9 317 aa21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 LINC00615Q96LM1 132 aaPredicted RBP21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 TBC1D10AQ9BXI6 508 aa21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 CHRAC1Q9NRG0 131 aa21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 SYBUQ9NX95 663 aa21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 NEU2Q9Y3R4 380 aa21.9■■□□□ 1.1
PTCHD3P2-201ENST00000424937 KLHL33A6NCF5 533 aa21.89■■□□□ 1.09
PTCHD3P2-201ENST00000424937 TMEM63AO94886 807 aa21.89■■□□□ 1.09
PTCHD3P2-201ENST00000424937 MAGEA6P43360 314 aa21.89■■□□□ 1.09
PTCHD3P2-201ENST00000424937 NPY2RP49146 381 aa21.89■■□□□ 1.09
PTCHD3P2-201ENST00000424937 ANKRD22Q5VYY1 191 aa21.89■■□□□ 1.09
PTCHD3P2-201ENST00000424937 METRNLQ641Q3 311 aa21.89■■□□□ 1.09
PTCHD3P2-201ENST00000424937 TMEM26Q6ZUK4 368 aa21.89■■□□□ 1.09
PTCHD3P2-201ENST00000424937 FBXO39Q8N4B4 442 aa21.89■■□□□ 1.09
PTCHD3P2-201ENST00000424937 OR4L1Q8NH43 312 aa21.89■■□□□ 1.09
PTCHD3P2-201ENST00000424937 HM13Q8TCT9 377 aa21.89■■□□□ 1.09
PTCHD3P2-201ENST00000424937 CPT1BQ92523 772 aa21.89■■□□□ 1.09
PTCHD3P2-201ENST00000424937 PEX13Q92968 403 aa21.89■■□□□ 1.09
PTCHD3P2-201ENST00000424937 CCDC74BQ96LY2 380 aa21.89■■□□□ 1.09
PTCHD3P2-201ENST00000424937 DDX47Q9H0S4 455 aaKnown RBP21.89■■□□□ 1.09
PTCHD3P2-201ENST00000424937 TMEM9Q9P0T7 183 aa21.89■■□□□ 1.09
PTCHD3P2-201ENST00000424937 LOXL2Q9Y4K0 774 aa21.89■■□□□ 1.09
PTCHD3P2-201ENST00000424937 PCDHGA8Q9Y5G5 932 aa21.89■■□□□ 1.09
PTCHD3P2-201ENST00000424937 SAR1BQ9Y6B6 198 aa21.89■■□□□ 1.09
PTCHD3P2-201ENST00000424937 PRAMEF33A0A0G2JMD5 474 aa21.88■■□□□ 1.09
PTCHD3P2-201ENST00000424937 IGHV5-10-1A0A0J9YXX1 117 aa21.88■■□□□ 1.09
PTCHD3P2-201ENST00000424937 PLD2O14939 933 aa21.88■■□□□ 1.09
PTCHD3P2-201ENST00000424937 TLX3O43711 291 aaPredicted RBP21.88■■□□□ 1.09
PTCHD3P2-201ENST00000424937 DXOO77932 396 aaKnown RBP21.88■■□□□ 1.09
PTCHD3P2-201ENST00000424937 HGFP14210 728 aa21.88■■□□□ 1.09
PTCHD3P2-201ENST00000424937 HOXB3P14651 431 aaPredicted RBP21.88■■□□□ 1.09
PTCHD3P2-201ENST00000424937 MPSTP25325 297 aa21.88■■□□□ 1.09
PTCHD3P2-201ENST00000424937 RBMS1P29558 406 aaKnown RBP21.88■■□□□ 1.09
PTCHD3P2-201ENST00000424937 SARNPP82979 210 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms