RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 YIPF6Q96EC8 236 aa12.56□□□□□ -0.4
CTCFL-204ENST00000422869 ZNF300Q96RE9 604 aaPredicted RBP12.56□□□□□ -0.4
CTCFL-204ENST00000422869 PDGFDQ9GZP0 370 aaPredicted RBP12.56□□□□□ -0.4
CTCFL-204ENST00000422869 INTS6Q9UL03 887 aaKnown RBP12.56□□□□□ -0.4
CTCFL-204ENST00000422869 SUPT3HB4E1H0 165 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 LDB2O43679 373 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 KERAO60938 352 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 PAGE1O75459 146 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 USP2O75604 605 aaPredicted RBP12.55□□□□□ -0.4
CTCFL-204ENST00000422869 EIF2S1P05198 315 aaKnown RBP12.55□□□□□ -0.4
CTCFL-204ENST00000422869 RPS17P08708 135 aaKnown RBP12.55□□□□□ -0.4
CTCFL-204ENST00000422869 TCEA1P23193 301 aaKnown RBP12.55□□□□□ -0.4
CTCFL-204ENST00000422869 FPGSQ05932 587 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 PLA2G4EQ3MJ16 856 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 TMEM179BQ7Z7N9 219 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 FBXO39Q8N4B4 442 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 FRS2Q8WU20 508 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 FBLIM1Q8WUP2 373 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 OTUD5Q96G74 571 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 DHRS1Q96LJ7 313 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 TBATAQ96M53 351 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 ZNF583Q96ND8 569 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 RBM4BQ9BQ04 359 aaKnown RBP12.55□□□□□ -0.4
CTCFL-204ENST00000422869 RBM4Q9BWF3 364 aaKnown RBP12.55□□□□□ -0.4
CTCFL-204ENST00000422869 RBPJLQ9UBG7 517 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 NOX1Q9Y5S8 564 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 FGF10O15520 208 aaPredicted RBP12.55□□□□□ -0.4
CTCFL-204ENST00000422869 SLC2A3P11169 496 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 PTPN2P17706 415 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 CD40LGP29965 261 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 AGTR2P50052 363 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 NCS1P62166 190 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 PTPRCAPQ14761 206 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 AAK1Q2M2I8 961 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 C6orf136Q5SQH8 315 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 ATAD3BQ5T9A4 648 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 SPESP1Q6UW49 350 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 FBXO30Q8TB52 745 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 ZNF566Q969W8 418 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 NUSAP1Q9BXS6 441 aaKnown RBP12.55□□□□□ -0.4
CTCFL-204ENST00000422869 SLIRPQ9GZT3 109 aaKnown RBP12.55□□□□□ -0.4
CTCFL-204ENST00000422869 VTA1Q9NP79 307 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 MPP6Q9NZW5 540 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 SLCO3A1Q9UIG8 710 aa12.55□□□□□ -0.4
CTCFL-204ENST00000422869 PIN4Q9Y237 131 aaKnown RBP12.55□□□□□ -0.4
CTCFL-204ENST00000422869 POLR2AP24928 1970 aaKnown RBP12.55□□□□□ -0.4
CTCFL-204ENST00000422869 OTOFQ9HC10 1997 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 GRXCR2A6NFK2 248 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 NDST3O95803 873 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 CCDC159P0C7I6 412 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 PRKACGP22612 351 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 CCR1P32246 355 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 CYP2C18P33260 490 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 MAP2K4P45985 399 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 IFITM2Q01629 132 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 CDC20Q12834 499 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 SLC13A2Q13183 592 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 PRKG2Q13237 762 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 CDK5R2Q13319 367 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 ACOX1Q15067 660 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 HABP4Q5JVS0 413 aaKnown RBP12.54□□□□□ -0.4
CTCFL-204ENST00000422869 SIRPB2Q5JXA9 342 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 ANKS6Q68DC2 871 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 ADCK1Q86TW2 530 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 ARMC8Q8IUR7 673 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 SVOPLQ8N434 492 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 FNDC5Q8NAU1 212 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 PPP1R13LQ8WUF5 828 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 FIG4Q92562 907 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 KIAA1191Q96A73 305 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 CCDC115Q96NT0 180 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 ACTL8Q9H568 366 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 CATSPERBQ9H7T0 1116 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 GORASP2Q9H8Y8 452 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 POPDC3Q9HBV1 291 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 NT5MQ9NPB1 228 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 TMEFF2Q9UIK5 374 aaPredicted RBP12.54□□□□□ -0.4
CTCFL-204ENST00000422869 IFT52Q9Y366 437 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 TIMM13Q9Y5L4 95 aaPredicted RBP12.54□□□□□ -0.4
CTCFL-204ENST00000422869 LSM1O15116 133 aaKnown RBP12.54□□□□□ -0.4
CTCFL-204ENST00000422869 ECI2O75521 394 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 UROSP10746 265 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 EIF2DP41214 584 aaKnown RBP12.54□□□□□ -0.4
CTCFL-204ENST00000422869 SERPINB10P48595 397 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 YWHAHQ04917 246 aaPredicted RBP12.54□□□□□ -0.4
CTCFL-204ENST00000422869 UBXN11Q5T124 520 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 NANOGNBQ7Z5D8 188 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 NECAB2Q7Z6G3 386 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 P2RY8Q86VZ1 359 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 ATP6V0D2Q8N8Y2 350 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 MCOLN3Q8TDD5 553 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 TMEM40Q8WWA1 233 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 RORBQ92753 470 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 ITCHQ96J02 903 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 TXNDC15Q96J42 360 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 FCRL2Q96LA5 508 aaPredicted RBP12.54□□□□□ -0.4
CTCFL-204ENST00000422869 UGT2B28Q9BY64 529 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 NOL6Q9H6R4 1146 aaKnown RBP12.54□□□□□ -0.4
CTCFL-204ENST00000422869 ERVK-18Q9QC07 812 aa12.54□□□□□ -0.4
CTCFL-204ENST00000422869 RNF112Q9ULX5 631 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms