RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 CSRP3P50461 194 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 IRF9Q00978 393 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 TIFABQ6ZNK6 161 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 CDHR3Q6ZTQ4 885 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 BTN2A2Q8WVV5 523 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 GLYATL1Q969I3 302 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 ISL2Q96A47 359 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 TOE1Q96GM8 510 aaKnown RBP15.33■□□□□ 0.04
SHMT2-202ENST00000414700 SLC13A1Q9BZW2 595 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 RAD18Q9NS91 495 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 SCOCQ9UIL1 159 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 LRCH1Q9Y2L9 728 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 IGLV3-16A0A075B6K0 115 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 PRMT5O14744 637 aaPredicted RBP15.33■□□□□ 0.04
SHMT2-202ENST00000414700 NVLO15381 856 aaKnown RBP15.33■□□□□ 0.04
SHMT2-202ENST00000414700 IGLV3-19P01714 112 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 SERPINB8P50452 374 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 IRF4Q15306 451 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 KIAA1161Q6NSJ0 714 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 ZNF765Q7L2R6 523 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 DET1Q7L5Y6 550 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 LONP2Q86WA8 852 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 RAVER1Q8IY67 606 aaKnown RBP15.33■□□□□ 0.04
SHMT2-202ENST00000414700 TP53I13Q8NBR0 393 aaPredicted RBP15.33■□□□□ 0.04
SHMT2-202ENST00000414700 DTX3LQ8TDB6 740 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 SMC6Q96SB8 1091 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 COPS8Q99627 209 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 AARSD1Q9BTE6 412 aaKnown RBP15.33■□□□□ 0.04
SHMT2-202ENST00000414700 C6orf106Q9H6K1 298 aaPredicted RBP15.33■□□□□ 0.04
SHMT2-202ENST00000414700 MLXIPLQ9NP71 852 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 ZDHHC3Q9NYG2 299 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 INVSQ9Y283 1065 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 VWA7Q9Y334 891 aa15.33■□□□□ 0.04
SHMT2-202ENST00000414700 K7ESF4 209 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 HGSO14964 777 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-202ENST00000414700 SLC25A14O95258 325 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-202ENST00000414700 APBB3O95704 486 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 SEMA4FO95754 770 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 C2P06681 752 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 SLC35E2BP0CK96 405 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 PKMP14618 531 aaKnown RBP15.32■□□□□ 0.04
SHMT2-202ENST00000414700 AGERQ15109 404 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 PNCKQ6P2M8 343 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 TMEM207Q6UWW9 146 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 RBFAQ8N0V3 343 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 PLD6Q8N2A8 252 aaKnown RBP15.32■□□□□ 0.04
SHMT2-202ENST00000414700 SPATA6LQ8N4H0 392 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 BANPQ8N9N5 519 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 FAM81AQ8TBF8 368 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 LKAAEAR1Q8TD35 194 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 SCG3Q8WXD2 468 aaKnown RBP15.32■□□□□ 0.04
SHMT2-202ENST00000414700 ERP27Q96DN0 273 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 VPS35Q96QK1 796 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 SLC30A3Q99726 388 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 LGR4Q9BXB1 951 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 UNKQ9C0B0 810 aaKnown RBP15.32■□□□□ 0.04
SHMT2-202ENST00000414700 DCLRE1BQ9H816 532 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 ZNF358Q9NW07 568 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 NKIRAS1Q9NYS0 192 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 WSB2Q9NYS7 404 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-202ENST00000414700 STOML1Q9UBI4 398 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 OAS3Q9Y6K5 1087 aaKnown RBP15.32■□□□□ 0.04
SHMT2-202ENST00000414700 ANKRD12Q6UB98 2062 aa15.32■□□□□ 0.04
SHMT2-202ENST00000414700 A0A096LPK6 155 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 TYROBPO43914 113 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 STMN1P16949 149 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 ZNF7P17097 686 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-202ENST00000414700 TAC1P20366 129 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 AKT1P31749 480 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 VHLP40337 213 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 CXCL12P48061 93 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 RASSF2P50749 326 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 ADARP55265 1226 aaKnown RBP15.31■□□□□ 0.04
SHMT2-202ENST00000414700 RAB10P61026 200 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 POU4F1Q01851 419 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 SLC18A2Q05940 514 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 DMWDQ09019 674 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 DNAJC3Q13217 504 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 SGCGQ13326 291 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 INPP5AQ14642 412 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 RNF220Q5VTB9 566 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 TSSK4Q6SA08 328 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 RAPH1Q70E73 1250 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 DDHD1Q8NEL9 900 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 OR2T34Q8NGX1 318 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 ULK4Q96C45 1275 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 SGF29Q96ES7 293 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 GPR174Q9BXC1 333 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 CLPBQ9H078 707 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 VPS11Q9H270 941 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 SGK2Q9HBY8 427 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 SENP1Q9P0U3 644 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 VPS9D1Q9Y2B5 631 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 CA5BQ9Y2D0 317 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 OR1A2Q9Y585 309 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 ACTL7BQ9Y614 415 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 USH1CQ9Y6N9 552 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 IGHV1OR15-9A0A0B4J2B8 117 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 PFDN6O15212 129 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 SGTAO43765 313 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms