RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 DTX3LQ8TDB6 740 aa9.85□□□□□ -0.83
DDB1-202ENST00000414411 PPP4R1Q8TF05 950 aa9.85□□□□□ -0.83
DDB1-202ENST00000414411 CDKN2AIPNLQ96HQ2 116 aa9.85□□□□□ -0.83
DDB1-202ENST00000414411 VPS39Q96JC1 886 aa9.85□□□□□ -0.83
DDB1-202ENST00000414411 RILPQ96NA2 401 aa9.85□□□□□ -0.83
DDB1-202ENST00000414411 CCDC106Q9BWC9 280 aa9.85□□□□□ -0.83
DDB1-202ENST00000414411 FAM96AQ9H5X1 160 aa9.85□□□□□ -0.83
DDB1-202ENST00000414411 BPIFA1Q9NP55 256 aa9.85□□□□□ -0.83
DDB1-202ENST00000414411 IARS2Q9NSE4 1012 aaKnown RBP9.85□□□□□ -0.83
DDB1-202ENST00000414411 NSMCE4AQ9NXX6 385 aa9.85□□□□□ -0.83
DDB1-202ENST00000414411 NFKBIL1Q9UBC1 381 aaPredicted RBP9.85□□□□□ -0.83
DDB1-202ENST00000414411 TAGLN3Q9UI15 199 aa9.85□□□□□ -0.83
DDB1-202ENST00000414411 LAMA1P25391 3075 aa9.85□□□□□ -0.83
DDB1-202ENST00000414411 CEP192Q8TEP8 1941 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 A0A1W2PQU0 124 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 CCDC78A2IDD5 438 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 LRRC72A6NJI9 287 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 H7C0S8 307 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 GAPDHSO14556 408 aaPredicted RBP9.84□□□□□ -0.83
DDB1-202ENST00000414411 RNGTTO60942 597 aaKnown RBP9.84□□□□□ -0.83
DDB1-202ENST00000414411 RECQL5O94762 991 aaPredicted RBP9.84□□□□□ -0.83
DDB1-202ENST00000414411 LMNAP02545 664 aaKnown RBP9.84□□□□□ -0.83
DDB1-202ENST00000414411 ARNTP27540 789 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 HADHAP40939 763 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 CPA2P48052 419 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 FNTBP49356 437 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 CSRP3P50461 194 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 PTPN5P54829 565 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 ABCE1P61221 599 aaKnown RBP9.84□□□□□ -0.83
DDB1-202ENST00000414411 PPP2CBP62714 309 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 PPP2CAP67775 309 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 XIAPP98170 497 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 IRF9Q00978 393 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 ITGA9Q13797 1035 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 ZNF528Q3MIS6 628 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 MAVSQ7Z434 540 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 NLRP8Q86W28 1048 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 NRSN1Q8IZ57 195 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 CXorf40AQ8TE69 158 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 ASB12Q8WXK4 309 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 DNAJC1Q96KC8 554 aaKnown RBP9.84□□□□□ -0.83
DDB1-202ENST00000414411 TBATAQ96M53 351 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 GPR22Q99680 433 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 FAM126AQ9BYI3 521 aaPredicted RBP9.84□□□□□ -0.83
DDB1-202ENST00000414411 CDH19Q9H159 772 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 C6orf106Q9H6K1 298 aaPredicted RBP9.84□□□□□ -0.83
DDB1-202ENST00000414411 DCLRE1BQ9H816 532 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 CAB39LQ9H9S4 337 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 IL26Q9NPH9 171 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 PKP3Q9Y446 797 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 ZNF106Q9H2Y7 1883 aaKnown RBP9.84□□□□□ -0.83
DDB1-202ENST00000414411 TTC36A6NLP5 189 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 PRR5-ARHGAP8B1AHC4 643 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 B2RBV5 119 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 G3V2L1 256 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 GOLGA8TH3BQL2 631 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 WNT9AO14904 365 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 TM7SF2O76062 418 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 IGHV4-34P06331 123 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 C2P06681 752 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 CCR5P51681 352 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 DCDC1P59894 354 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 ARHGAP8P85298 464 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 DPTQ07507 201 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 PEX6Q13608 980 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 UBAP2LQ14157 1087 aaKnown RBP9.84□□□□□ -0.83
DDB1-202ENST00000414411 RCN2Q14257 317 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 ACOX1Q15067 660 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 ZC3HC1Q86WB0 502 aaKnown RBP9.84□□□□□ -0.83
DDB1-202ENST00000414411 CNTN4Q8IWV2 1026 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 ARHGAP24Q8N264 748 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 RBM15BQ8NDT2 890 aaKnown RBP9.84□□□□□ -0.83
DDB1-202ENST00000414411 ACVR1CQ8NER5 493 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 CADM4Q8NFZ8 388 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 CFAP61Q8NHU2 1237 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 GIMAP7Q8NHV1 300 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 SCAMP4Q969E2 229 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 HDAC10Q969S8 669 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 DTD2Q96FN9 168 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 RSRC1Q96IZ7 334 aaKnown RBP9.84□□□□□ -0.83
DDB1-202ENST00000414411 ANKRD27Q96NW4 1050 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 PLEKHG4BQ96PX9 1271 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 GPR174Q9BXC1 333 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 SLC17A9Q9BYT1 436 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 PCED1AQ9H1Q7 454 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 ABCG8Q9H221 673 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 RHOJQ9H4E5 214 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 FAM83DQ9H4H8 585 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 SUDS3Q9H7L9 328 aaPredicted RBP9.84□□□□□ -0.83
DDB1-202ENST00000414411 DNAJC28Q9NX36 388 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 KCTD5Q9NXV2 234 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 PKD2L2Q9NZM6 624 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 INVSQ9Y283 1065 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 COQ6Q9Y2Z9 468 aa9.84□□□□□ -0.83
DDB1-202ENST00000414411 PLXNA2O75051 1894 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 PRR23AA6NEV1 266 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 GOLGA8CPA6NN73 597 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 AGAP14A8MT82 685 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 H0Y3Z8 333 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 CCL22O00626 93 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms