RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 TMPRSS11EQ9UL52 423 aa13.9□□□□□ -0.19
LIMS2-206ENST00000409754 KPNA3O00505 521 aaPredicted RBP13.89□□□□□ -0.19
LIMS2-206ENST00000409754 UBFD1O14562 309 aaKnown RBP13.89□□□□□ -0.19
LIMS2-206ENST00000409754 MAGEC1O60732 1142 aa13.89□□□□□ -0.19
LIMS2-206ENST00000409754 SIX3O95343 332 aaPredicted RBP13.89□□□□□ -0.19
LIMS2-206ENST00000409754 ENO1P06733 434 aaKnown RBP13.89□□□□□ -0.19
LIMS2-206ENST00000409754 KRT16P08779 473 aa13.89□□□□□ -0.19
LIMS2-206ENST00000409754 HLA-EP13747 358 aa13.89□□□□□ -0.19
LIMS2-206ENST00000409754 ITGB6P18564 788 aa13.89□□□□□ -0.19
LIMS2-206ENST00000409754 ELF3P78545 371 aaPredicted RBP13.89□□□□□ -0.19
LIMS2-206ENST00000409754 PDCD2Q16342 344 aaPredicted RBP13.89□□□□□ -0.19
LIMS2-206ENST00000409754 TTLL9Q3SXZ7 439 aa13.89□□□□□ -0.19
LIMS2-206ENST00000409754 ANKS6Q68DC2 871 aa13.89□□□□□ -0.19
LIMS2-206ENST00000409754 RPS27LQ71UM5 84 aaKnown RBP13.89□□□□□ -0.19
LIMS2-206ENST00000409754 TECPR1Q7Z6L1 1165 aa13.89□□□□□ -0.19
LIMS2-206ENST00000409754 ZNF687Q8N1G0 1237 aa13.89□□□□□ -0.19
LIMS2-206ENST00000409754 MYO1HQ8N1T3 1032 aa13.89□□□□□ -0.19
LIMS2-206ENST00000409754 PIP4K2CQ8TBX8 421 aa13.89□□□□□ -0.19
LIMS2-206ENST00000409754 BTBD10Q9BSF8 475 aa13.89□□□□□ -0.19
LIMS2-206ENST00000409754 ZSCAN5AQ9BUG6 496 aa13.89□□□□□ -0.19
LIMS2-206ENST00000409754 WDR55Q9H6Y2 383 aaPredicted RBP13.89□□□□□ -0.19
LIMS2-206ENST00000409754 TRPV5Q9NQA5 729 aa13.89□□□□□ -0.19
LIMS2-206ENST00000409754 KCTD5Q9NXV2 234 aa13.89□□□□□ -0.19
LIMS2-206ENST00000409754 THAP10Q9P2Z0 257 aaPredicted RBP13.89□□□□□ -0.19
LIMS2-206ENST00000409754 CD84Q9UIB8 345 aa13.89□□□□□ -0.19
LIMS2-206ENST00000409754 SARDHQ9UL12 918 aa13.89□□□□□ -0.19
LIMS2-206ENST00000409754 TRAF6Q9Y4K3 522 aa13.89□□□□□ -0.19
LIMS2-206ENST00000409754 PLXNB3Q9ULL4 1909 aa13.89□□□□□ -0.19
LIMS2-206ENST00000409754 KMT2EQ8IZD2 1858 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 TMEM233B4DJY2 109 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 E9PBE3 544 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 H0Y858 1186 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 EIF3FO00303 357 aaPredicted RBP13.88□□□□□ -0.19
LIMS2-206ENST00000409754 KLHL41O60662 606 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 SNX2O60749 519 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 OR56A5P0C7T3 313 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 CBSLP0DN79 551 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 NCF2P19878 526 aaPredicted RBP13.88□□□□□ -0.19
LIMS2-206ENST00000409754 EPHA3P29320 983 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 EEF1DP29692 281 aaKnown RBP13.88□□□□□ -0.19
LIMS2-206ENST00000409754 CBSP35520 551 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 ETV3P41162 512 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 GRIA2P42262 883 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 HK3P52790 923 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 INHBCP55103 352 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 LSM12Q3MHD2 195 aaKnown RBP13.88□□□□□ -0.19
LIMS2-206ENST00000409754 POM121L1PQ3SYA9 428 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 HENMT1Q5T8I9 393 aaKnown RBP13.88□□□□□ -0.19
LIMS2-206ENST00000409754 FBXW10Q5XX13 1052 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 CYB5D1Q6P9G0 228 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 SERPINA13PQ6UXR4 307 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 LIPIQ6XZB0 460 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 Q6ZVL8 140 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 SFTPA1Q8IWL2 248 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 SUGP1Q8IWZ8 645 aaKnown RBP13.88□□□□□ -0.19
LIMS2-206ENST00000409754 UBALD2Q8IYN6 164 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 NRSN1Q8IZ57 195 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 ARRDC3Q96B67 414 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 PPP1R16AQ96I34 528 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 FAM129BQ96TA1 746 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 TBC1D10AQ9BXI6 508 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 MEAF6Q9HAF1 191 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 TNFRSF12AQ9NP84 129 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 SUN2Q9UH99 717 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 CA14Q9ULX7 337 aa13.88□□□□□ -0.19
LIMS2-206ENST00000409754 GOLGA8QA0A0J9YX86 632 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 GOLGA8OA6NCC3 632 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 ANTXRLA6NF34 631 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 CFAP99D6REC4 459 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 SPECC1L-ADORA2AF8WAN1 911 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 GOLGA8NF8WBI6 632 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 SDHDO14521 159 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 NEMP1O14524 444 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 CDK14O94921 469 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 KAT7O95251 611 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 JUNP05412 331 aaKnown RBP13.87□□□□□ -0.19
LIMS2-206ENST00000409754 FGF4P08620 206 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 ELFN1P0C7U0 828 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 PRDX6P30041 224 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 CDH13P55290 713 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 CLCQ05315 142 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 ELP6Q0PNE2 266 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 LCP2Q13094 533 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 TGFBIQ15582 683 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 ZNF284Q2VY69 593 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 ITPRIPL2Q3MIP1 535 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 ACSBG2Q5FVE4 666 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 SBSNQ6UWP8 590 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 DSG4Q86SJ6 1040 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 CLYBLQ8N0X4 340 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 CPSF7Q8N684 471 aaKnown RBP13.87□□□□□ -0.19
LIMS2-206ENST00000409754 ACTRT2Q8TDY3 377 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 ZNF483Q8TF39 744 aaPredicted RBP13.87□□□□□ -0.19
LIMS2-206ENST00000409754 NAT14Q8WUY8 206 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 EZH1Q92800 747 aaPredicted RBP13.87□□□□□ -0.19
LIMS2-206ENST00000409754 DNASE1L2Q92874 299 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 SCAMP4Q969E2 229 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 UTP4Q969X6 686 aaKnown RBP13.87□□□□□ -0.19
LIMS2-206ENST00000409754 DCUN1D1Q96GG9 259 aa13.87□□□□□ -0.19
LIMS2-206ENST00000409754 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms