RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 MSRAQ9UJ68 235 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 VPS28Q9UK41 221 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 MRPS23Q9Y3D9 190 aaKnown RBP18.8■□□□□ 0.6
CCDC50-202ENST00000392456 FAM237BA0A1B0GVD1 139 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 FAM159BA6NKW6 160 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 ALDH1A2O94788 518 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 GRK2P25098 689 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 WEE1P30291 646 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 CD70P32970 193 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 PTGS2P35354 604 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 STX1BP61266 288 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 PRKCQQ04759 706 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 ADGRE1Q14246 886 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 UBE2UQ5VVX9 321 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 GALNT18Q6P9A2 607 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 CPXM2Q8N436 756 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 TCP10LQ8TDR4 215 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 STMN3Q9NZ72 180 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 PSAT1Q9Y617 370 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 H3BUI4 141 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 DCKP27707 260 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 LRIT3Q3SXY7 679 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 ARHGAP15Q53QZ3 475 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 LINC00523Q86TU6 105 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 RASSF5Q8WWW0 418 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 ZNF669Q96BR6 464 aaPredicted RBP18.79■□□□□ 0.6
CCDC50-202ENST00000392456 LRGUKQ96M69 825 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 POLR1EQ9GZS1 481 aaKnown RBP18.79■□□□□ 0.6
CCDC50-202ENST00000392456 RSPH9Q9H1X1 276 aaPredicted RBP18.79■□□□□ 0.6
CCDC50-202ENST00000392456 FETUBQ9UGM5 382 aa18.79■□□□□ 0.6
CCDC50-202ENST00000392456 E2F8A0AVK6 867 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 TRIM77I1YAP6 450 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 BMP1P13497 986 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 HPCAL1P37235 193 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 NPY2RP49146 381 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 HSF5Q4G112 596 aaPredicted RBP18.78■□□□□ 0.6
CCDC50-202ENST00000392456 FAM122CQ6P4D5 195 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 ADAMTSL2Q86TH1 951 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 AKAP14Q86UN6 197 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 METTL2AQ96IZ6 378 aaKnown RBP18.78■□□□□ 0.6
CCDC50-202ENST00000392456 ZNF599Q96NL3 588 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 FERD3LQ96RJ6 166 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 IL22Q9GZX6 179 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 SLC2A6Q9UGQ3 507 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 INTS6Q9UL03 887 aaKnown RBP18.78■□□□□ 0.6
CCDC50-202ENST00000392456 WNT6Q9Y6F9 365 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 ARPC4-TTLL3A0A0A6YYG9 625 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 C1orf232A0A0U1RR37 186 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 HMX2A2RU54 273 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 TM9SF1O15321 606 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 LINC01565O15544 149 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 PSMD3O43242 534 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 IL1BP01584 269 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 POLBP06746 335 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 PFKLP17858 780 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 PKLRP30613 574 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 HADHAP40939 763 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 TAGLNQ01995 201 aaKnown RBP18.78■□□□□ 0.6
CCDC50-202ENST00000392456 LMAN2Q12907 356 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 STX3Q13277 289 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 RALGPS1Q5JS13 557 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 ASTLQ6HA08 431 aaPredicted RBP18.78■□□□□ 0.6
CCDC50-202ENST00000392456 DGLUCYQ7Z3D6 616 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 DSG4Q86SJ6 1040 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 TMEM151BQ8IW70 566 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 ACDQ96AP0 544 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 CCDC124Q96CT7 223 aaKnown RBP18.78■□□□□ 0.6
CCDC50-202ENST00000392456 RSPRY1Q96DX4 576 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 TXNDC15Q96J42 360 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 MGME1Q9BQP7 344 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 KCNK4Q9NYG8 393 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 TXNDC16Q9P2K2 825 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 KLQ9UEF7 1012 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 AP4S1Q9Y587 144 aa18.78■□□□□ 0.6
CCDC50-202ENST00000392456 TYW5A2RUC4 315 aaKnown RBP18.77■□□□□ 0.6
CCDC50-202ENST00000392456 hCG_2039718K7EN88 272 aa18.77■□□□□ 0.6
CCDC50-202ENST00000392456 FGF19O95750 216 aa18.77■□□□□ 0.6
CCDC50-202ENST00000392456 GLP2RO95838 553 aa18.77■□□□□ 0.6
CCDC50-202ENST00000392456 PRKCGP05129 697 aa18.77■□□□□ 0.6
CCDC50-202ENST00000392456 DDX6P26196 483 aaKnown RBP eCLIP18.77■□□□□ 0.6
CCDC50-202ENST00000392456 CDH15P55291 814 aa18.77■□□□□ 0.6
CCDC50-202ENST00000392456 BMPR2Q13873 1038 aa18.77■□□□□ 0.6
CCDC50-202ENST00000392456 ZNF77Q15935 545 aa18.77■□□□□ 0.6
CCDC50-202ENST00000392456 PGS1Q32NB8 556 aa18.77■□□□□ 0.6
CCDC50-202ENST00000392456 MPPE1Q53F39 396 aa18.77■□□□□ 0.6
CCDC50-202ENST00000392456 PERM1Q5SV97 790 aa18.77■□□□□ 0.6
CCDC50-202ENST00000392456 SLC26A11Q86WA9 606 aa18.77■□□□□ 0.6
CCDC50-202ENST00000392456 SAMD14Q8IZD0 417 aaPredicted RBP18.77■□□□□ 0.6
CCDC50-202ENST00000392456 TTC9Q92623 222 aa18.77■□□□□ 0.6
CCDC50-202ENST00000392456 SMIM14Q96QK8 99 aa18.77■□□□□ 0.6
CCDC50-202ENST00000392456 AGAP2Q99490 1192 aa18.77■□□□□ 0.6
CCDC50-202ENST00000392456 CINPQ9BW66 212 aaPredicted RBP18.77■□□□□ 0.6
CCDC50-202ENST00000392456 C12orf65Q9H3J6 166 aaKnown RBP18.77■□□□□ 0.6
CCDC50-202ENST00000392456 POLMQ9NP87 494 aaPredicted RBP18.77■□□□□ 0.6
CCDC50-202ENST00000392456 OLAHQ9NV23 265 aa18.77■□□□□ 0.6
CCDC50-202ENST00000392456 RIMS3Q9UJD0 308 aa18.77■□□□□ 0.6
CCDC50-202ENST00000392456 FCF1Q9Y324 198 aaKnown RBP18.77■□□□□ 0.6
CCDC50-202ENST00000392456 ST14Q9Y5Y6 855 aa18.77■□□□□ 0.6
CCDC50-202ENST00000392456 PRR5-ARHGAP8B1AHC4 643 aa18.77■□□□□ 0.59
CCDC50-202ENST00000392456 TRIM24O15164 1050 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms