RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 TSPAN12O95859 305 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 PIM1P11309 404 aaPredicted RBP19.19■□□□□ 0.66
SSU72-204ENST00000378726 FCARP24071 287 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 MTTPP55157 894 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 NFKB2Q00653 900 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 HYAL1Q12794 435 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 ARHGEF7Q14155 803 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 TSNQ15631 228 aaKnown RBP19.19■□□□□ 0.66
SSU72-204ENST00000378726 PFKFB4Q16877 469 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 GAB4Q2WGN9 574 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 KBTBD6Q86V97 674 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 CPNE9Q8IYJ1 553 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 PTGR2Q8N8N7 351 aaPredicted RBP19.19■□□□□ 0.66
SSU72-204ENST00000378726 L3HYPDHQ96EM0 354 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 LINGO1Q96FE5 620 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 OR52B2Q96RD2 323 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 PRSS21Q9Y6M0 314 aa19.19■□□□□ 0.66
SSU72-204ENST00000378726 AGAP14A8MT82 685 aa19.18■□□□□ 0.66
SSU72-204ENST00000378726 KERAO60938 352 aa19.18■□□□□ 0.66
SSU72-204ENST00000378726 C1SP09871 688 aa19.18■□□□□ 0.66
SSU72-204ENST00000378726 TIMP2P16035 220 aa19.18■□□□□ 0.66
SSU72-204ENST00000378726 PRDX6P30041 224 aa19.18■□□□□ 0.66
SSU72-204ENST00000378726 SPINT3P49223 89 aa19.18■□□□□ 0.66
SSU72-204ENST00000378726 PDGFRLQ15198 375 aa19.18■□□□□ 0.66
SSU72-204ENST00000378726 MMEL1Q495T6 779 aa19.18■□□□□ 0.66
SSU72-204ENST00000378726 SH2D4BQ5SQS7 431 aa19.18■□□□□ 0.66
SSU72-204ENST00000378726 ANKRD54Q6NXT1 300 aa19.18■□□□□ 0.66
SSU72-204ENST00000378726 FBXL19Q6PCT2 694 aa19.18■□□□□ 0.66
SSU72-204ENST00000378726 NXPE1Q8N323 547 aa19.18■□□□□ 0.66
SSU72-204ENST00000378726 NCSTNQ92542 709 aa19.18■□□□□ 0.66
SSU72-204ENST00000378726 PPP1R36Q96LQ0 422 aa19.18■□□□□ 0.66
SSU72-204ENST00000378726 NUF2Q9BZD4 464 aa19.18■□□□□ 0.66
SSU72-204ENST00000378726 HPS4Q9NQG7 708 aa19.18■□□□□ 0.66
SSU72-204ENST00000378726 GTSE1Q9NYZ3 720 aa19.18■□□□□ 0.66
SSU72-204ENST00000378726 GNPTGQ9UJJ9 305 aa19.18■□□□□ 0.66
SSU72-204ENST00000378726 CDH7Q9ULB5 785 aa19.18■□□□□ 0.66
SSU72-204ENST00000378726 A0A1B0GVG6 124 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 BTN3A1O00481 513 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 CYP2A6P11509 494 aaPredicted RBP19.17■□□□□ 0.66
SSU72-204ENST00000378726 GFAPP14136 432 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 HERVK_113P63132 956 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 GRM2Q14416 872 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 UNC50Q53HI1 259 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 RAB44Q7Z6P3 723 aaPredicted RBP19.17■□□□□ 0.66
SSU72-204ENST00000378726 LRIG1Q96JA1 1093 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 LENG8Q96PV6 779 aaPredicted RBP19.17■□□□□ 0.66
SSU72-204ENST00000378726 RTKNQ9BST9 563 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 ERVK-6Q9BXR3 956 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 GSTO2Q9H4Y5 243 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 WDR55Q9H6Y2 383 aaPredicted RBP19.17■□□□□ 0.66
SSU72-204ENST00000378726 GOLGA8QA0A0J9YX86 632 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 GOLGA8OA6NCC3 632 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 GOLGA8NF8WBI6 632 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 TXNDC9O14530 226 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 CASQ2O14958 399 aaPredicted RBP19.17■□□□□ 0.66
SSU72-204ENST00000378726 ETS2P15036 469 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 ITGB6P18564 788 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 PDK3Q15120 406 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 POM121L1PQ3SYA9 428 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 ATP13A5Q4VNC0 1218 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 ZNF805Q5CZA5 627 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 ZDHHC20Q5W0Z9 365 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 VITQ6UXI7 678 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 FUBP1Q96AE4 644 aaKnown RBP19.17■□□□□ 0.66
SSU72-204ENST00000378726 PLEKHG4BQ96PX9 1271 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 PCDH12Q9NPG4 1184 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 TCF7L2Q9NQB0 619 aa19.17■□□□□ 0.66
SSU72-204ENST00000378726 NPEPPSL1A6NEC2 478 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 TMEM233B4DJY2 109 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 SUPT3HB4E1H0 165 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 SUPT3HO75486 399 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 ECI2O75521 394 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 SLC25A14O95258 325 aaPredicted RBP19.16■□□□□ 0.66
SSU72-204ENST00000378726 SIX3O95343 332 aaPredicted RBP19.16■□□□□ 0.66
SSU72-204ENST00000378726 TRIM16O95361 564 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 VIPR1P32241 457 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 GALNT1Q10472 559 aaPredicted RBP19.16■□□□□ 0.66
SSU72-204ENST00000378726 GRAMD1BQ3KR37 738 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 TRMOQ9BU70 441 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 NSUN3Q9H649 340 aaKnown RBP19.16■□□□□ 0.66
SSU72-204ENST00000378726 CD84Q9UIB8 345 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 SYCE1LA8MT33 242 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 NEMP1O14524 444 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 ZNF30P17039 623 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 TSPAN8P19075 237 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 XPAP23025 273 aaPredicted RBP19.16■□□□□ 0.66
SSU72-204ENST00000378726 EPHA3P29320 983 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 FOLH1Q04609 750 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 ATAT1Q5SQI0 421 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 METTL21CQ5VZV1 264 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 CUZD1Q86UP6 607 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 ABCG8Q9H221 673 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 PKD2L2Q9NZM6 624 aa19.16■□□□□ 0.66
SSU72-204ENST00000378726 TSPAN11A1L157 253 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 CCDC85CA6NKD9 419 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 C16orf96A6NNT2 1141 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 UPK3BL1B0FP48 263 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 UPK3BL2E5RIL1 263 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 AIM2O14862 343 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 CDH13P55290 713 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms