RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 FAM189BP81408 668 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 IL23RQ5VWK5 629 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 LRRC66Q68CR7 880 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 ZNF513Q8N8E2 541 aaPredicted RBP14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 RTKNQ9BST9 563 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 SPHK2Q9NRA0 654 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 B4GALT6Q9UBX8 382 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 BLOC1S6Q9UL45 172 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 ERVW-1Q9UQF0 538 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 PCCBP05166 539 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 DLDP09622 509 aaKnown RBP14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 HLA-EP13747 358 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 IMPDH1P20839 514 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 CTGFP29279 349 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 TMED10P49755 219 aaKnown RBP14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 GTF2H2Q13888 395 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 DMC1Q14565 340 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 GTF2H2CQ6P1K8 395 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 Q6ZVL8 140 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 CYS1Q717R9 158 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 STK32CQ86UX6 486 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 FBXO30Q8TB52 745 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 CEP295NLQ96MC4 621 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 FERD3LQ96RJ6 166 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 BBS4Q96RK4 519 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 BDH2Q9BUT1 245 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 GALNT8Q9NY28 637 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 ZDHHC3Q9NYG2 299 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 GALPQ9UBC7 116 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 PRPF19Q9UMS4 504 aaKnown RBP14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 AP4S1Q9Y587 144 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 ACTL7AQ9Y615 435 aa14.02□□□□□ -0.17
SHROOM1-203ENST00000378679 KLF11O14901 512 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 FFAR2O15552 330 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 EPN2O95208 641 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 ANXA11P50995 505 aaKnown RBP14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 TAZQ16635 292 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 VPS26BQ4G0F5 336 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 SLC9B1Q4ZJI4 515 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 P3H2Q8IVL5 708 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 DSELQ8IZU8 1212 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 ZNF614Q8N883 585 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 PNPLA1Q8N8W4 532 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 PYCR2Q96C36 320 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 OR52E6Q96RD3 313 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 RTP3Q9BQQ7 232 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 MIR1-1HGQ9H1L0 117 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 OR2AG1Q9H205 316 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 PSMD13Q9UNM6 376 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 C16orf96A6NNT2 1141 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 FAM155AB1AL88 458 aaPredicted RBP14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 TMEM233B4DJY2 109 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 H0Y858 1186 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 SCAMP1O15126 338 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 CLDN9O95484 217 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 UROSP10746 265 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 PCYT1AP49585 367 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 CHIT1Q13231 466 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 ARHGAP12Q8IWW6 846 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 NAT14Q8WUY8 206 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 STARD8Q92502 1023 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 PPM1MQ96MI6 270 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 LRTM1Q9HBL6 345 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 SAGE1Q9NXZ1 904 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 PCNTO95613 3336 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 MCM3APO60318 1980 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 TRBV23OR9-2A0A075B6M9 112 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 ECI2O75521 394 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 NRG1Q02297 640 aaPredicted RBP14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 MFSD4BQ5TF39 518 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 CWF19L1Q69YN2 538 aaKnown RBP14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 SULT1C3Q6IMI6 304 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 ANO7Q6IWH7 933 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 RPS27LQ71UM5 84 aaKnown RBP14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 TMEM25Q86YD3 366 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 SCML4Q8N228 414 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 TCAIMQ8N3R3 496 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 BEND7Q8N7W2 519 aaPredicted RBP14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 EEF1AKMT1Q8WVE0 214 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 DLG3Q92796 817 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 SIRPGQ9P1W8 387 aa14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 MARCH4Q9P2E8 410 aaPredicted RBP14.01□□□□□ -0.17
SHROOM1-203ENST00000378679 TM7SF2O76062 418 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 GALK1P51570 392 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 HERVK_113P63132 956 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 PCLAFQ15004 111 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 RALGPS1Q5JS13 557 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 C17orf64Q86WR6 236 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 APCDD1Q8J025 514 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 ATG16L2Q8NAA4 619 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 OSCP1Q8WVF1 389 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 QRFPRQ96P65 431 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 OR52B2Q96RD2 323 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 TRMT61BQ9BVS5 477 aaKnown RBP14□□□□□ -0.17
SHROOM1-203ENST00000378679 ERVK-6Q9BXR3 956 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 IL36AQ9UHA7 158 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 RPL26P61254 145 aaKnown RBP14□□□□□ -0.17
SHROOM1-203ENST00000378679 ZNF783Q6ZMS7 281 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 PANX1Q96RD7 426 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms