RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 KIF5AQ12840 1032 aa16.73■□□□□ 0.27
BRCC3-202ENST00000340647 LY6DQ14210 128 aa16.73■□□□□ 0.27
BRCC3-202ENST00000340647 GPR18Q14330 331 aa16.73■□□□□ 0.27
BRCC3-202ENST00000340647 NFE2L1Q14494 772 aa16.73■□□□□ 0.27
BRCC3-202ENST00000340647 LDLRAP1Q5SW96 308 aa16.73■□□□□ 0.27
BRCC3-202ENST00000340647 TIPARPQ7Z3E1 657 aaKnown RBP16.73■□□□□ 0.27
BRCC3-202ENST00000340647 LILRA3Q8N6C8 439 aaPredicted RBP16.73■□□□□ 0.27
BRCC3-202ENST00000340647 FAM71DQ8N9W8 422 aa16.73■□□□□ 0.27
BRCC3-202ENST00000340647 GDAP1Q8TB36 358 aa16.73■□□□□ 0.27
BRCC3-202ENST00000340647 RTP4Q96DX8 246 aa16.73■□□□□ 0.27
BRCC3-202ENST00000340647 SGF29Q96ES7 293 aa16.73■□□□□ 0.27
BRCC3-202ENST00000340647 AHCYL2Q96HN2 611 aaKnown RBP16.73■□□□□ 0.27
BRCC3-202ENST00000340647 DDA1Q9BW61 102 aa16.73■□□□□ 0.27
BRCC3-202ENST00000340647 SLC39A1Q9NY26 324 aa16.73■□□□□ 0.27
BRCC3-202ENST00000340647 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.73■□□□□ 0.27
BRCC3-202ENST00000340647 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.73■□□□□ 0.27
BRCC3-202ENST00000340647 AAR2Q9Y312 384 aaKnown RBP16.73■□□□□ 0.27
BRCC3-202ENST00000340647 PKP3Q9Y446 797 aa16.73■□□□□ 0.27
BRCC3-202ENST00000340647 CYSRT1A8MQ03 144 aa16.72■□□□□ 0.27
BRCC3-202ENST00000340647 PDZK1P1A8MUH7 402 aa16.72■□□□□ 0.27
BRCC3-202ENST00000340647 MIF4GDA9UHW6 222 aaKnown RBP16.72■□□□□ 0.27
BRCC3-202ENST00000340647 PRSS56P0CW18 603 aa16.72■□□□□ 0.27
BRCC3-202ENST00000340647 SLC2A4P14672 509 aa16.72■□□□□ 0.27
BRCC3-202ENST00000340647 CD82P27701 267 aa16.72■□□□□ 0.27
BRCC3-202ENST00000340647 CSTF2P33240 577 aaKnown RBP eCLIP16.72■□□□□ 0.27
BRCC3-202ENST00000340647 ZNF658BQ4V348 819 aaPredicted RBP16.72■□□□□ 0.27
BRCC3-202ENST00000340647 METRNLQ641Q3 311 aa16.72■□□□□ 0.27
BRCC3-202ENST00000340647 AMZ2Q86W34 360 aa16.72■□□□□ 0.27
BRCC3-202ENST00000340647 EXD3Q8N9H8 876 aa16.72■□□□□ 0.27
BRCC3-202ENST00000340647 WBP1Q96G27 269 aa16.72■□□□□ 0.27
BRCC3-202ENST00000340647 CTRCQ99895 268 aa16.72■□□□□ 0.27
BRCC3-202ENST00000340647 TBL1YQ9BQ87 522 aa16.72■□□□□ 0.27
BRCC3-202ENST00000340647 TMEM121Q9BTD3 319 aa16.72■□□□□ 0.27
BRCC3-202ENST00000340647 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.72■□□□□ 0.27
BRCC3-202ENST00000340647 FAM96AQ9H5X1 160 aa16.72■□□□□ 0.27
BRCC3-202ENST00000340647 KLHL3Q9UH77 587 aa16.72■□□□□ 0.27
BRCC3-202ENST00000340647 PILRAQ9UKJ1 303 aa16.72■□□□□ 0.27
BRCC3-202ENST00000340647 PCDHGA4Q9Y5G9 962 aa16.72■□□□□ 0.27
BRCC3-202ENST00000340647 SPTBP11277 2137 aa16.72■□□□□ 0.27
BRCC3-202ENST00000340647 KIF1CO43896 1103 aaKnown RBP16.71■□□□□ 0.27
BRCC3-202ENST00000340647 UBXN7O94888 489 aa16.71■□□□□ 0.27
BRCC3-202ENST00000340647 VIPP01282 170 aa16.71■□□□□ 0.27
BRCC3-202ENST00000340647 ANKRD34CP0C6C1 535 aa16.71■□□□□ 0.27
BRCC3-202ENST00000340647 TPH1P17752 444 aa16.71■□□□□ 0.27
BRCC3-202ENST00000340647 IDSP22304 550 aa16.71■□□□□ 0.27
BRCC3-202ENST00000340647 CYP4F2P78329 520 aa16.71■□□□□ 0.27
BRCC3-202ENST00000340647 TMPRSS15P98073 1019 aa16.71■□□□□ 0.27
BRCC3-202ENST00000340647 ITGA9Q13797 1035 aa16.71■□□□□ 0.27
BRCC3-202ENST00000340647 OASLQ15646 514 aaKnown RBP16.71■□□□□ 0.27
BRCC3-202ENST00000340647 RPE65Q16518 533 aa16.71■□□□□ 0.27
BRCC3-202ENST00000340647 PARP6Q2NL67 630 aa16.71■□□□□ 0.27
BRCC3-202ENST00000340647 DET1Q7L5Y6 550 aa16.71■□□□□ 0.27
BRCC3-202ENST00000340647 FAM129CQ86XR2 697 aa16.71■□□□□ 0.27
BRCC3-202ENST00000340647 ATG4AQ8WYN0 398 aa16.71■□□□□ 0.27
BRCC3-202ENST00000340647 C9orf72Q96LT7 481 aa16.71■□□□□ 0.27
BRCC3-202ENST00000340647 EPB41L1Q9H4G0 881 aa16.71■□□□□ 0.27
BRCC3-202ENST00000340647 ASB8Q9H765 288 aa16.71■□□□□ 0.27
BRCC3-202ENST00000340647 FBXO8Q9NRD0 319 aa16.71■□□□□ 0.27
BRCC3-202ENST00000340647 POT1Q9NUX5 634 aa16.71■□□□□ 0.27
BRCC3-202ENST00000340647 AKAP7Q9P0M2 348 aaPredicted RBP16.71■□□□□ 0.27
BRCC3-202ENST00000340647 PSMD13Q9UNM6 376 aa16.71■□□□□ 0.27
BRCC3-202ENST00000340647 DNMT3AQ9Y6K1 912 aaPredicted RBP16.71■□□□□ 0.27
BRCC3-202ENST00000340647 TRBV5-4A0A0C4DH59 114 aa16.7■□□□□ 0.26
BRCC3-202ENST00000340647 CAPN5O15484 640 aaPredicted RBP16.7■□□□□ 0.26
BRCC3-202ENST00000340647 KCNJ13O60928 360 aa16.7■□□□□ 0.26
BRCC3-202ENST00000340647 PSMA3P25788 255 aa16.7■□□□□ 0.26
BRCC3-202ENST00000340647 GTF2H3Q13889 308 aa16.7■□□□□ 0.26
BRCC3-202ENST00000340647 SIX1Q15475 284 aaPredicted RBP16.7■□□□□ 0.26
BRCC3-202ENST00000340647 FNBP1LQ5T0N5 605 aa16.7■□□□□ 0.26
BRCC3-202ENST00000340647 PRUNE1Q86TP1 453 aa16.7■□□□□ 0.26
BRCC3-202ENST00000340647 SYCE1Q8N0S2 351 aa16.7■□□□□ 0.26
BRCC3-202ENST00000340647 UBL4BQ8N7F7 174 aa16.7■□□□□ 0.26
BRCC3-202ENST00000340647 SPDYE1Q8NFV5 336 aaPredicted RBP16.7■□□□□ 0.26
BRCC3-202ENST00000340647 DNAJC1Q96KC8 554 aaKnown RBP16.7■□□□□ 0.26
BRCC3-202ENST00000340647 LINC00615Q96LM1 132 aaPredicted RBP16.7■□□□□ 0.26
BRCC3-202ENST00000340647 INSM2Q96T92 566 aaPredicted RBP16.7■□□□□ 0.26
BRCC3-202ENST00000340647 C19orf43Q9BQ61 176 aa16.7■□□□□ 0.26
BRCC3-202ENST00000340647 SLC12A9Q9BXP2 914 aa16.7■□□□□ 0.26
BRCC3-202ENST00000340647 STN1Q9H668 368 aaKnown RBP16.7■□□□□ 0.26
BRCC3-202ENST00000340647 PIH1D1Q9NWS0 290 aaKnown RBP16.7■□□□□ 0.26
BRCC3-202ENST00000340647 SEMA5BQ9P283 1151 aa16.7■□□□□ 0.26
BRCC3-202ENST00000340647 SNRNP200O75643 2136 aaKnown RBP16.69■□□□□ 0.26
BRCC3-202ENST00000340647 IGLV3-16A0A075B6K0 115 aa16.69■□□□□ 0.26
BRCC3-202ENST00000340647 C2orf81A6NN90 581 aa16.69■□□□□ 0.26
BRCC3-202ENST00000340647 STMND1H3BQB6 276 aa16.69■□□□□ 0.26
BRCC3-202ENST00000340647 ZNF28P17035 718 aa16.69■□□□□ 0.26
BRCC3-202ENST00000340647 CAPZBP47756 277 aa16.69■□□□□ 0.26
BRCC3-202ENST00000340647 SH3BP2P78314 561 aa16.69■□□□□ 0.26
BRCC3-202ENST00000340647 PRPSAP1Q14558 356 aa16.69■□□□□ 0.26
BRCC3-202ENST00000340647 BCL7AQ4VC05 210 aa16.69■□□□□ 0.26
BRCC3-202ENST00000340647 MANEAQ5SRI9 462 aa16.69■□□□□ 0.26
BRCC3-202ENST00000340647 TMEM164Q5U3C3 297 aa16.69■□□□□ 0.26
BRCC3-202ENST00000340647 DUS1LQ6P1R4 473 aaKnown RBP16.69■□□□□ 0.26
BRCC3-202ENST00000340647 NXPE1Q8N323 547 aa16.69■□□□□ 0.26
BRCC3-202ENST00000340647 TAB3Q8N5C8 712 aaPredicted RBP16.69■□□□□ 0.26
BRCC3-202ENST00000340647 RNF10Q8N5U6 811 aaKnown RBP16.69■□□□□ 0.26
BRCC3-202ENST00000340647 GLIS1Q8NBF1 620 aa16.69■□□□□ 0.26
BRCC3-202ENST00000340647 AVL9Q8NBF6 648 aa16.69■□□□□ 0.26
BRCC3-202ENST00000340647 TTC13Q8NBP0 860 aa16.69■□□□□ 0.26
BRCC3-202ENST00000340647 RNF31Q96EP0 1072 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms