RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 DEFB128Q7Z7B8 93 aa17.48■□□□□ 0.39
LRCH3-201ENST00000334859 EPHX4Q8IUS5 362 aa17.48■□□□□ 0.39
LRCH3-201ENST00000334859 WFDC5Q8TCV5 224 aa17.48■□□□□ 0.39
LRCH3-201ENST00000334859 RMND5BQ96G75 393 aaPredicted RBP17.48■□□□□ 0.39
LRCH3-201ENST00000334859 RPL10LQ96L21 214 aaKnown RBP17.48■□□□□ 0.39
LRCH3-201ENST00000334859 SLC22A12Q96S37 553 aa17.48■□□□□ 0.39
LRCH3-201ENST00000334859 HAUS8Q9BT25 410 aa17.48■□□□□ 0.39
LRCH3-201ENST00000334859 ANKRD60Q9BZ19 345 aa17.48■□□□□ 0.39
LRCH3-201ENST00000334859 CIPCQ9C0C6 399 aa17.48■□□□□ 0.39
LRCH3-201ENST00000334859 PIF1Q9H611 641 aa17.48■□□□□ 0.39
LRCH3-201ENST00000334859 PNPLA3Q9NST1 481 aa17.48■□□□□ 0.39
LRCH3-201ENST00000334859 INTS7Q9NVH2 962 aaKnown RBP17.48■□□□□ 0.39
LRCH3-201ENST00000334859 DUS2Q9NX74 493 aaKnown RBP17.48■□□□□ 0.39
LRCH3-201ENST00000334859 ZIM2Q9NZV7 527 aa17.48■□□□□ 0.39
LRCH3-201ENST00000334859 MYRFQ9Y2G1 1151 aa17.48■□□□□ 0.39
LRCH3-201ENST00000334859 DHRS7Q9Y394 339 aa17.48■□□□□ 0.39
LRCH3-201ENST00000334859 PCDHB1Q9Y5F3 818 aa17.48■□□□□ 0.39
LRCH3-201ENST00000334859 FAM234BA2RU67 622 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 PLOD2O00469 737 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 FZD6O60353 706 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 H6PDO95479 791 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 GUCA1CO95843 209 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 GPIP06744 558 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 CNPP09543 421 aaKnown RBP17.47■□□□□ 0.39
LRCH3-201ENST00000334859 IL12AP29459 219 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 MRPL19P49406 292 aaKnown RBP17.47■□□□□ 0.39
LRCH3-201ENST00000334859 SH3BGRP55822 239 aaPredicted RBP17.47■□□□□ 0.39
LRCH3-201ENST00000334859 CREB5Q02930 508 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 PRKG2Q13237 762 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 NR6A1Q15406 480 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 SPATS1Q496A3 300 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 SPOUT1Q5T280 376 aaKnown RBP17.47■□□□□ 0.39
LRCH3-201ENST00000334859 SBSNQ6UWP8 590 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 SERPINA9Q86WD7 417 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 FAM47BQ8NA70 645 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 BOCQ9BWV1 1114 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 PADI4Q9UM07 663 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 DMTF1Q9Y222 760 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 V9GYQ6 96 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 C1orf232A0A0U1RR37 186 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 RNF103-CHMP3A0A140T963 221 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 PGLSO95336 258 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 BMP1P13497 986 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 GTF2H2Q13888 395 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 NHSL2Q5HYW2 709 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 GTF2H2CQ6P1K8 395 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 SLC2A7Q6PXP3 512 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 Q6ZSR9 355 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 CMTR2Q8IYT2 770 aaKnown RBP17.47■□□□□ 0.39
LRCH3-201ENST00000334859 SFRP1Q8N474 314 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 TRIML2Q8N7C3 387 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 GOLM1Q8NBJ4 401 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 ZFP28Q8NHY6 868 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 PROKR1Q8TCW9 393 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 TRMT2BQ96GJ1 504 aaKnown RBP17.47■□□□□ 0.39
LRCH3-201ENST00000334859 MPP4Q96JB8 637 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 APOL5Q9BWW9 433 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 RBM38Q9H0Z9 239 aaKnown RBP17.47■□□□□ 0.39
LRCH3-201ENST00000334859 MUC13Q9H3R2 512 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 NSUN3Q9H649 340 aaKnown RBP17.47■□□□□ 0.39
LRCH3-201ENST00000334859 MAGEE1Q9HCI5 957 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 PTTG2Q9NZH5 202 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 OAZ3Q9UMX2 235 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 TNPO3Q9Y5L0 923 aaKnown RBP17.47■□□□□ 0.39
LRCH3-201ENST00000334859 ANAPC1Q9H1A4 1944 aa17.47■□□□□ 0.39
LRCH3-201ENST00000334859 RAD51BO15315 384 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 FFAR2O15552 330 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 ABLIM3O94929 683 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 ZNF7P17097 686 aaPredicted RBP17.46■□□□□ 0.39
LRCH3-201ENST00000334859 AP1S1P61966 158 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 INTS11Q5TA45 600 aaKnown RBP17.46■□□□□ 0.39
LRCH3-201ENST00000334859 CERS6Q6ZMG9 384 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 CLDN19Q8N6F1 224 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 OR4F6Q8NGB9 312 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 CENPNQ96H22 339 aaPredicted RBP17.46■□□□□ 0.39
LRCH3-201ENST00000334859 HHIPL1Q96JK4 782 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 ZFC3H1O60293 1989 aaKnown RBP17.46■□□□□ 0.39
LRCH3-201ENST00000334859 MYCP01106 439 aaPredicted RBP17.46■□□□□ 0.39
LRCH3-201ENST00000334859 ADRM1Q16186 407 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 NANOGP8Q6NSW7 305 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 B3GNT6Q6ZMB0 384 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.46■□□□□ 0.398e-7■■■■□ 21.3
LRCH3-201ENST00000334859 EP400NLQ6ZTU2 488 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 ZFAND4Q86XD8 727 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 PACRGLQ8N7B6 248 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 C9orf16Q9BUW7 83 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 ASB8Q9H765 288 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 NANOGQ9H9S0 305 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 ZFYVE1Q9HBF4 777 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 SMOXQ9NWM0 555 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 EVLQ9UI08 416 aaPredicted RBP17.46■□□□□ 0.39
LRCH3-201ENST00000334859 ZMYM5Q9UJ78 669 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 GNPTGQ9UJJ9 305 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 USP22Q9UPT9 525 aa17.46■□□□□ 0.39
LRCH3-201ENST00000334859 POLR3HQ9Y535 204 aaPredicted RBP17.46■□□□□ 0.39
LRCH3-201ENST00000334859 H3BNH8 94 aa17.45■□□□□ 0.38
LRCH3-201ENST00000334859 OR7A17O14581 309 aa17.45■□□□□ 0.38
LRCH3-201ENST00000334859 TRIM16O95361 564 aa17.45■□□□□ 0.38
LRCH3-201ENST00000334859 EFEMP2O95967 443 aa17.45■□□□□ 0.38
LRCH3-201ENST00000334859 OTCP00480 354 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms