RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 CXCL10P02778 98 aa20.2■□□□□ 0.82
LINC01006-201ENST00000333319 MTHFD1P11586 935 aaKnown RBP20.2■□□□□ 0.82
LINC01006-201ENST00000333319 OXTRP30559 389 aa20.2■□□□□ 0.82
LINC01006-201ENST00000333319 SOX11P35716 441 aa20.2■□□□□ 0.82
LINC01006-201ENST00000333319 HTR6P50406 440 aa20.2■□□□□ 0.82
LINC01006-201ENST00000333319 SLC5A9Q2M3M2 681 aa20.2■□□□□ 0.82
LINC01006-201ENST00000333319 TXNDC8Q6A555 127 aa20.2■□□□□ 0.82
LINC01006-201ENST00000333319 IL27RAQ6UWB1 636 aa20.2■□□□□ 0.82
LINC01006-201ENST00000333319 RBM44Q6ZP01 1051 aaKnown RBP20.2■□□□□ 0.82
LINC01006-201ENST00000333319 GOLGA7Q7Z5G4 137 aa20.2■□□□□ 0.82
LINC01006-201ENST00000333319 ADAMTSL2Q86TH1 951 aa20.2■□□□□ 0.82
LINC01006-201ENST00000333319 PAF1Q8N7H5 531 aa20.2■□□□□ 0.82
LINC01006-201ENST00000333319 PROKR1Q8TCW9 393 aa20.2■□□□□ 0.82
LINC01006-201ENST00000333319 SEZ6LQ9BYH1 1024 aa20.2■□□□□ 0.82
LINC01006-201ENST00000333319 ZIM2Q9NZV7 527 aa20.2■□□□□ 0.82
LINC01006-201ENST00000333319 A0A1B0GTW7 788 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 GOLGA8CPA6NN73 597 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 GREM1O60565 184 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 ZNF7P17097 686 aaPredicted RBP20.19■□□□□ 0.82
LINC01006-201ENST00000333319 GKP32189 559 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 AP1S1P61966 158 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 CREB5Q02930 508 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 LIPEQ05469 1076 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 APOFQ13790 326 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 PCBP2Q15366 365 aaKnown RBP eCLIP20.19■□□□□ 0.82
LINC01006-201ENST00000333319 SPATS1Q496A3 300 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 CARM1Q86X55 608 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 KIAA2013Q8IYS2 634 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 SFRP1Q8N474 314 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 DCAF4L2Q8NA75 395 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 NMD3Q96D46 503 aaKnown RBP20.19■□□□□ 0.82
LINC01006-201ENST00000333319 TMEM74Q96NL1 305 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 KCTD14Q9BQ13 255 aaPredicted RBP20.19■□□□□ 0.82
LINC01006-201ENST00000333319 ASB8Q9H765 288 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 ZFYVE1Q9HBF4 777 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 DNMT3BQ9UBC3 853 aaKnown RBP20.19■□□□□ 0.82
LINC01006-201ENST00000333319 TNPO3Q9Y5L0 923 aaKnown RBP20.19■□□□□ 0.82
LINC01006-201ENST00000333319 CPQQ9Y646 472 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 C1orf232A0A0U1RR37 186 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 GAPDHSO14556 408 aaPredicted RBP20.19■□□□□ 0.82
LINC01006-201ENST00000333319 INPP4BO15327 924 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 KATNA1O75449 491 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 LATS1O95835 1130 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 NELFEP18615 380 aaKnown RBP20.19■□□□□ 0.82
LINC01006-201ENST00000333319 ATN1P54259 1190 aaPredicted RBP20.19■□□□□ 0.82
LINC01006-201ENST00000333319 GTF2H2Q13888 395 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 GTF2H2CQ6P1K8 395 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 ADGRG5Q8IZF4 528 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 OR4F6Q8NGB9 312 aa20.19■□□□□ 0.82
LINC01006-201ENST00000333319 ZNF334Q9HCZ1 680 aaPredicted RBP20.19■□□□□ 0.82
LINC01006-201ENST00000333319 DUS2Q9NX74 493 aaKnown RBP20.19■□□□□ 0.82
LINC01006-201ENST00000333319 ZFC3H1O60293 1989 aaKnown RBP20.19■□□□□ 0.82
LINC01006-201ENST00000333319 ARHGAP10A1A4S6 786 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 FAM234BA2RU67 622 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 OR7A17O14581 309 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 FFAR2O15552 330 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 GUCA1CO95843 209 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 S100BP04271 92 aaPredicted RBP20.18■□□□□ 0.82
LINC01006-201ENST00000333319 CNPP09543 421 aaKnown RBP20.18■□□□□ 0.82
LINC01006-201ENST00000333319 NCK1P16333 377 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 CYP51A1Q16850 503 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 NHSL2Q5HYW2 709 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 CLDN19Q8N6F1 224 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 GOLM1Q8NBJ4 401 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 LKAAEAR1Q8TD35 194 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 AUTS2Q8WXX7 1259 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 RPL10LQ96L21 214 aaKnown RBP20.18■□□□□ 0.82
LINC01006-201ENST00000333319 AGPAT4Q9NRZ5 378 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 INTS7Q9NVH2 962 aaKnown RBP20.18■□□□□ 0.82
LINC01006-201ENST00000333319 PRSS21Q9Y6M0 314 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 MICAL3Q7RTP6 2002 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 GNRH1P01148 92 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 FASP25445 335 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 EPHB3P54753 998 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 BCL2L1Q07817 233 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 KRT80Q6KB66 452 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 NANOGP8Q6NSW7 305 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 FAM43BQ6ZT52 329 aaPredicted RBP20.18■□□□□ 0.82
LINC01006-201ENST00000333319 CBR4Q8N4T8 237 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 NSUN3Q9H649 340 aaKnown RBP20.18■□□□□ 0.82
LINC01006-201ENST00000333319 NANOGQ9H9S0 305 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 VCX3AQ9NNX9 186 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 ST14Q9Y5Y6 855 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 PLXNA4Q9HCM2 1894 aa20.18■□□□□ 0.82
LINC01006-201ENST00000333319 PDLIM1O00151 329 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 GFRA2O00451 464 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 PLOD2O00469 737 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 VILLO15195 856 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 RAD51BO15315 384 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 TRIM16O95361 564 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 CLDN7O95471 211 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 UGT1A1P22309 533 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 UGT1A4P22310 534 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 UGT1A3P35503 534 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 UGT1A5P35504 534 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 PLOD1Q02809 727 aaPredicted RBP20.17■□□□□ 0.82
LINC01006-201ENST00000333319 PRKG2Q13237 762 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 NFATC2Q13469 925 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 DEFB115Q30KQ5 88 aa20.17■□□□□ 0.82
LINC01006-201ENST00000333319 MYLK3Q32MK0 819 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms