RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 FAM156AQ8NDB6 213 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 RHEBL1Q8TAI7 183 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 HERVK_113Q902F9 699 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 ZNF707Q96C28 371 aaPredicted RBP13.41□□□□□ -0.26
VMP1-201ENST00000262291 C19orf60Q96EN9 201 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 CCDC28BQ9BUN5 200 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 AKTIPQ9H8T0 292 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 MEAF6Q9HAF1 191 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 B4GALT6Q9UBX8 382 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 ADAMTS6Q9UKP5 1117 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 HS3ST2Q9Y278 367 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 PFDN6O15212 129 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 SNX2O60749 519 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 ESR1P03372 595 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 HSPA1AP0DMV8 641 aaKnown RBP13.41□□□□□ -0.26
VMP1-201ENST00000262291 HSPA1BP0DMV9 641 aaKnown RBP13.41□□□□□ -0.26
VMP1-201ENST00000262291 THRAP10827 490 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 HOXB8P17481 243 aaPredicted RBP13.41□□□□□ -0.26
VMP1-201ENST00000262291 EPHA5P54756 1037 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 ATP13A5Q4VNC0 1218 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 ARSIQ5FYB1 569 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 PAOXQ6QHF9 649 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 MBOAT1Q6ZNC8 495 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 SNX20Q7Z614 316 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 SYVN1Q86TM6 617 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 TWIST2Q8WVJ9 160 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 KCNJ9Q92806 393 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 SCAMP4Q969E2 229 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.41□□□□□ -0.26
VMP1-201ENST00000262291 MAELQ96JY0 434 aaKnown RBP13.41□□□□□ -0.26
VMP1-201ENST00000262291 CDRT15Q96T59 188 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 C1orf21Q9H246 121 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 EBF3Q9H4W6 596 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 BRD9Q9H8M2 597 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 PPM1HQ9ULR3 514 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 AZIN1O14977 448 aa13.4□□□□□ -0.26
VMP1-201ENST00000262291 SOCS5O75159 536 aa13.4□□□□□ -0.26
VMP1-201ENST00000262291 PGM3O95394 542 aa13.4□□□□□ -0.26
VMP1-201ENST00000262291 ALDOCP09972 364 aaKnown RBP13.4□□□□□ -0.26
VMP1-201ENST00000262291 PBX2P40425 430 aa13.4□□□□□ -0.26
VMP1-201ENST00000262291 DPP6P42658 865 aa13.4□□□□□ -0.26
VMP1-201ENST00000262291 ATP6V0D1P61421 351 aa13.4□□□□□ -0.26
VMP1-201ENST00000262291 NFKB2Q00653 900 aa13.4□□□□□ -0.26
VMP1-201ENST00000262291 UBE2Q1Q7Z7E8 422 aa13.4□□□□□ -0.26
VMP1-201ENST00000262291 OR52B6Q8NGF0 335 aa13.4□□□□□ -0.26
VMP1-201ENST00000262291 OR2A12Q8NGT7 310 aa13.4□□□□□ -0.26
VMP1-201ENST00000262291 PBXIP1Q96AQ6 731 aa13.4□□□□□ -0.26
VMP1-201ENST00000262291 RTKNQ9BST9 563 aa13.4□□□□□ -0.26
VMP1-201ENST00000262291 STK39Q9UEW8 545 aa13.4□□□□□ -0.26
VMP1-201ENST00000262291 ZNF225Q9UK10 706 aa13.4□□□□□ -0.26
VMP1-201ENST00000262291 LZTS1Q9Y250 596 aa13.4□□□□□ -0.26
VMP1-201ENST00000262291 VPS9D1Q9Y2B5 631 aa13.4□□□□□ -0.26
VMP1-201ENST00000262291 HELZP42694 1942 aaKnown RBP13.4□□□□□ -0.26
VMP1-201ENST00000262291 A0A0J9YVX5 310 aa13.4□□□□□ -0.27
VMP1-201ENST00000262291 XYLBO75191 536 aa13.4□□□□□ -0.27
VMP1-201ENST00000262291 KATNA1O75449 491 aa13.4□□□□□ -0.27
VMP1-201ENST00000262291 ZNF7P17097 686 aaPredicted RBP13.4□□□□□ -0.27
VMP1-201ENST00000262291 ACRV1P26436 265 aa13.4□□□□□ -0.27
VMP1-201ENST00000262291 SPAM1P38567 509 aa13.4□□□□□ -0.27
VMP1-201ENST00000262291 GDF5P43026 501 aa13.4□□□□□ -0.27
VMP1-201ENST00000262291 GALK1P51570 392 aa13.4□□□□□ -0.27
VMP1-201ENST00000262291 METAP1P53582 386 aa13.4□□□□□ -0.27
VMP1-201ENST00000262291 FASTKQ14296 549 aaKnown RBP13.4□□□□□ -0.27
VMP1-201ENST00000262291 ANKS6Q68DC2 871 aa13.4□□□□□ -0.27
VMP1-201ENST00000262291 FRA10AC1Q70Z53 315 aa13.4□□□□□ -0.27
VMP1-201ENST00000262291 NET1Q7Z628 596 aaPredicted RBP13.4□□□□□ -0.27
VMP1-201ENST00000262291 PELI3Q8N2H9 469 aa13.4□□□□□ -0.27
VMP1-201ENST00000262291 AFAP1L2Q8N4X5 818 aa13.4□□□□□ -0.27
VMP1-201ENST00000262291 SMG7Q92540 1137 aaKnown RBP13.4□□□□□ -0.27
VMP1-201ENST00000262291 HGH1Q9BTY7 390 aa13.4□□□□□ -0.27
VMP1-201ENST00000262291 ERVW-1Q9UQF0 538 aa13.4□□□□□ -0.27
VMP1-201ENST00000262291 DHRS7Q9Y394 339 aa13.4□□□□□ -0.27
VMP1-201ENST00000262291 CCDC160A6NGH7 325 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 LEFTY1O75610 366 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 C1SP09871 688 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 POLR2EP19388 210 aaKnown RBP13.39□□□□□ -0.27
VMP1-201ENST00000262291 SFSWAPQ12872 951 aaKnown RBP13.39□□□□□ -0.27
VMP1-201ENST00000262291 CBX3Q13185 183 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 ART3Q13508 389 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 TGFBIQ15582 683 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 CLYBLQ8N0X4 340 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 CPSF7Q8N684 471 aaKnown RBP13.39□□□□□ -0.27
VMP1-201ENST00000262291 CDYL2Q8N8U2 506 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 KYQ8NBH2 561 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 ACTRT2Q8TDY3 377 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 SLC26A7Q8TE54 656 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 TUBGCP3Q96CW5 907 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 NR1H4Q96RI1 486 aaPredicted RBP13.39□□□□□ -0.27
VMP1-201ENST00000262291 ECSITQ9BQ95 431 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 NSUN3Q9H649 340 aaKnown RBP13.39□□□□□ -0.27
VMP1-201ENST00000262291 TDRKHQ9Y2W6 561 aaKnown RBP13.39□□□□□ -0.27
VMP1-201ENST00000262291 OTOL1A6NHN0 477 aaPredicted RBP13.39□□□□□ -0.27
VMP1-201ENST00000262291 POP4O95707 220 aaKnown RBP13.39□□□□□ -0.27
VMP1-201ENST00000262291 PIK3CGP48736 1102 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 HK2P52789 917 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 PLOD1Q02809 727 aaPredicted RBP13.39□□□□□ -0.27
VMP1-201ENST00000262291 CCNIQ14094 377 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 MAP7Q14244 749 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 GSTA3Q16772 222 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 PHKG1Q16816 387 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms