RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 A0A087WV48 116 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 A0A1W2PNU3 283 aaPredicted RBP12.54□□□□□ -0.4
VPREB3-201ENST00000248948 MGAT4DA6NG13 374 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 QSOX1O00391 747 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 PLD2O14939 933 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 SGTAO43765 313 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 POP7O75817 140 aaKnown RBP12.54□□□□□ -0.4
VPREB3-201ENST00000248948 ITGA2BP08514 1039 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 THRAP10827 490 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 BRAFP15056 766 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 CD1CP29017 333 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 FOXN2P32314 431 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 GRIA1P42261 906 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 PCBP4P57723 403 aaKnown RBP12.54□□□□□ -0.4
VPREB3-201ENST00000248948 KCNJ11Q14654 390 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 SEPT7Q16181 437 aaKnown RBP12.54□□□□□ -0.4
VPREB3-201ENST00000248948 AMZ1Q400G9 498 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 CCDC38Q502W7 563 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 ZRANB3Q5FWF4 1079 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 TSTD2Q5T7W7 516 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 CCDC137Q6PK04 289 aaKnown RBP12.54□□□□□ -0.4
VPREB3-201ENST00000248948 TMEM220Q6QAJ8 160 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 WDR74Q6RFH5 385 aaPredicted RBP12.54□□□□□ -0.4
VPREB3-201ENST00000248948 PACS1Q6VY07 963 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 CLEC14AQ86T13 490 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 SERPINA9Q86WD7 417 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 OR2L2Q8NH16 312 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 HM13Q8TCT9 377 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 GRK7Q8WTQ7 553 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 MAGOHBQ96A72 148 aaKnown RBP12.54□□□□□ -0.4
VPREB3-201ENST00000248948 CMKLR1Q99788 373 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 NUDT22Q9BRQ3 303 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 AP1M1Q9BXS5 423 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 FOXP3Q9BZS1 431 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 ZMYND15Q9H091 742 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 RDH14Q9HBH5 336 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 PYCARDQ9ULZ3 195 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 RAXQ9Y2V3 346 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 LAMA5O15230 3695 aa12.54□□□□□ -0.4
VPREB3-201ENST00000248948 MN1Q10571 1320 aaPredicted RBP12.54□□□□□ -0.4
VPREB3-201ENST00000248948 C17orf113A0A1B0GUU1 675 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 CDRT15L2A8MXV6 281 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 AP2A2O94973 939 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 VIPP01282 170 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 ATP1B2P14415 290 aaPredicted RBP12.53□□□□□ -0.4
VPREB3-201ENST00000248948 RBMS1P29558 406 aaKnown RBP12.53□□□□□ -0.4
VPREB3-201ENST00000248948 COILP38432 576 aaPredicted RBP12.53□□□□□ -0.4
VPREB3-201ENST00000248948 NSG1P42857 185 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 ARSDP51689 593 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 LIMK2P53671 638 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 DRG2P55039 364 aaKnown RBP12.53□□□□□ -0.4
VPREB3-201ENST00000248948 GPS1Q13098 491 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 NFE2L1Q14494 772 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 AARS2Q5JTZ9 985 aaKnown RBP12.53□□□□□ -0.4
VPREB3-201ENST00000248948 PCID2Q5JVF3 399 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 LYPLAL1Q5VWZ2 237 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 METRNLQ641Q3 311 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 LRRC8BQ6P9F7 803 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 CERS6Q6ZMG9 384 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 TMEM26Q6ZUK4 368 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 ZNF534Q76KX8 674 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 DET1Q7L5Y6 550 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 RAB11FIP2Q7L804 512 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 TMPRSS9Q7Z410 1059 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 BEND7Q8N7W2 519 aaPredicted RBP12.53□□□□□ -0.4
VPREB3-201ENST00000248948 FGF11Q92914 225 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 CXorf40BQ96DE9 158 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 SGF29Q96ES7 293 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 PRR11Q96HE9 360 aaPredicted RBP12.53□□□□□ -0.4
VPREB3-201ENST00000248948 AHCYL2Q96HN2 611 aaKnown RBP12.53□□□□□ -0.4
VPREB3-201ENST00000248948 CCDC74BQ96LY2 380 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 MRM3Q9HC36 420 aaKnown RBP12.53□□□□□ -0.4
VPREB3-201ENST00000248948 AKAP7Q9P0M2 348 aaPredicted RBP12.53□□□□□ -0.4
VPREB3-201ENST00000248948 SCHIP1Q9P0W5 487 aaPredicted RBP12.53□□□□□ -0.4
VPREB3-201ENST00000248948 ZNF624Q9P2J8 865 aaPredicted RBP12.53□□□□□ -0.4
VPREB3-201ENST00000248948 ACSL5Q9ULC5 683 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 NEU2Q9Y3R4 380 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 LOXL2Q9Y4K0 774 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 PCDHGA7Q9Y5G6 932 aa12.53□□□□□ -0.4
VPREB3-201ENST00000248948 IGHV5-10-1A0A0J9YXX1 117 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 CCDC162PA2VCL2 907 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 F8W8V4 182 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 TLX3O43711 291 aaPredicted RBP12.52□□□□□ -0.41
VPREB3-201ENST00000248948 KRT14P02533 472 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 SLC35G4P0C7Q5 338 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 MTHFD1P11586 935 aaKnown RBP12.52□□□□□ -0.41
VPREB3-201ENST00000248948 RPL10P27635 214 aaKnown RBP12.52□□□□□ -0.41
VPREB3-201ENST00000248948 PBLDP30039 288 aaPredicted RBP12.52□□□□□ -0.41
VPREB3-201ENST00000248948 SLC19A1P41440 591 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 NPY2RP49146 381 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 GNG11P61952 73 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 PRAMEP78395 509 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 SARNPP82979 210 aaKnown RBP12.52□□□□□ -0.41
VPREB3-201ENST00000248948 DBN1Q16643 649 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 PHF19Q5T6S3 580 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 PAPD7Q5XG87 772 aaKnown RBP12.52□□□□□ -0.41
VPREB3-201ENST00000248948 TMEM71Q6P5X7 295 aa12.52□□□□□ -0.41
VPREB3-201ENST00000248948 FAM83HQ6ZRV2 1179 aaPredicted RBP12.52□□□□□ -0.41
VPREB3-201ENST00000248948 ZNF761Q86XN6 746 aaPredicted RBP12.52□□□□□ -0.41
VPREB3-201ENST00000248948 PIANPQ8IYJ0 282 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms