RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 HGSO14964 777 aaPredicted RBP17.43■□□□□ 0.38
PNKP-230ENST00000638016 NVLO15381 856 aaKnown RBP17.43■□□□□ 0.38
PNKP-230ENST00000638016 PRAMEF1O95521 474 aa17.43■□□□□ 0.38
PNKP-230ENST00000638016 PTMAP06454 111 aaKnown RBP17.43■□□□□ 0.38
PNKP-230ENST00000638016 GPR89BP0CG08 455 aa17.43■□□□□ 0.38
PNKP-230ENST00000638016 TYRP1P17643 537 aa17.43■□□□□ 0.38
PNKP-230ENST00000638016 WT1P19544 449 aaPredicted RBP17.43■□□□□ 0.38
PNKP-230ENST00000638016 CETN2P41208 172 aa17.43■□□□□ 0.38
PNKP-230ENST00000638016 GFERP55789 205 aa17.43■□□□□ 0.38
PNKP-230ENST00000638016 SQSTM1Q13501 440 aa17.43■□□□□ 0.38
PNKP-230ENST00000638016 COL9A2Q14055 689 aaPredicted RBP17.43■□□□□ 0.38
PNKP-230ENST00000638016 KIR2DS5Q14953 304 aa17.43■□□□□ 0.38
PNKP-230ENST00000638016 CLCA4Q14CN2 919 aa17.43■□□□□ 0.38
PNKP-230ENST00000638016 TAF1AQ15573 450 aaPredicted RBP17.43■□□□□ 0.38
PNKP-230ENST00000638016 CLPPQ16740 277 aaPredicted RBP17.43■□□□□ 0.38
PNKP-230ENST00000638016 FAM129CQ86XR2 697 aa17.43■□□□□ 0.38
PNKP-230ENST00000638016 SYCE1Q8N0S2 351 aa17.43■□□□□ 0.38
PNKP-230ENST00000638016 DDHD1Q8NEL9 900 aa17.43■□□□□ 0.38
PNKP-230ENST00000638016 SLC35B2Q8TB61 432 aa17.43■□□□□ 0.38
PNKP-230ENST00000638016 ART4Q93070 314 aa17.43■□□□□ 0.38
PNKP-230ENST00000638016 TMEM159Q96B96 161 aa17.43■□□□□ 0.38
PNKP-230ENST00000638016 UBL7Q96S82 380 aaPredicted RBP17.43■□□□□ 0.38
PNKP-230ENST00000638016 ACSL6Q9UKU0 697 aa17.43■□□□□ 0.38
PNKP-230ENST00000638016 GUCA1BQ9UMX6 200 aa17.43■□□□□ 0.38
PNKP-230ENST00000638016 AAR2Q9Y312 384 aaKnown RBP17.43■□□□□ 0.38
PNKP-230ENST00000638016 B3GALT1Q9Y5Z6 326 aa17.43■□□□□ 0.38
PNKP-230ENST00000638016 EFCAB7A8K855 629 aa17.42■□□□□ 0.38
PNKP-230ENST00000638016 MIF4GDA9UHW6 222 aaKnown RBP17.42■□□□□ 0.38
PNKP-230ENST00000638016 ZW10O43264 779 aa17.42■□□□□ 0.38
PNKP-230ENST00000638016 STK10O94804 968 aaKnown RBP17.42■□□□□ 0.38
PNKP-230ENST00000638016 TPH1P17752 444 aa17.42■□□□□ 0.38
PNKP-230ENST00000638016 LPOP22079 712 aaPredicted RBP17.42■□□□□ 0.38
PNKP-230ENST00000638016 ZNF140P52738 457 aaPredicted RBP17.42■□□□□ 0.38
PNKP-230ENST00000638016 XIAPP98170 497 aa17.42■□□□□ 0.38
PNKP-230ENST00000638016 VAC14Q08AM6 782 aa17.42■□□□□ 0.38
PNKP-230ENST00000638016 GTF2H3Q13889 308 aa17.42■□□□□ 0.38
PNKP-230ENST00000638016 NFE2L1Q14494 772 aa17.42■□□□□ 0.38
PNKP-230ENST00000638016 PRPSAP1Q14558 356 aa17.42■□□□□ 0.38
PNKP-230ENST00000638016 KCTD19Q17RG1 926 aaPredicted RBP17.42■□□□□ 0.38
PNKP-230ENST00000638016 KCTD11Q693B1 232 aa17.42■□□□□ 0.38
PNKP-230ENST00000638016 TMEM220Q6QAJ8 160 aa17.42■□□□□ 0.38
PNKP-230ENST00000638016 XKR5Q6UX68 686 aa17.42■□□□□ 0.38
PNKP-230ENST00000638016 PRUNE1Q86TP1 453 aa17.42■□□□□ 0.38
PNKP-230ENST00000638016 GPR150Q8NGU9 434 aa17.42■□□□□ 0.38
PNKP-230ENST00000638016 ZNF398Q8TD17 642 aa17.42■□□□□ 0.38
PNKP-230ENST00000638016 FAM96AQ9H5X1 160 aa17.42■□□□□ 0.38
PNKP-230ENST00000638016 STN1Q9H668 368 aaKnown RBP17.42■□□□□ 0.38
PNKP-230ENST00000638016 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.42■□□□□ 0.38
PNKP-230ENST00000638016 FAM8A1Q9UBU6 413 aa17.42■□□□□ 0.38
PNKP-230ENST00000638016 PSMD13Q9UNM6 376 aa17.42■□□□□ 0.38
PNKP-230ENST00000638016 C5orf60A6NFR6 353 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 K7ENP7 123 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 POP7O75817 140 aaKnown RBP17.41■□□□□ 0.38
PNKP-230ENST00000638016 C1QL1O75973 258 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 SRP72O76094 671 aaKnown RBP17.41■□□□□ 0.38
PNKP-230ENST00000638016 VIPP01282 170 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 PRSS56P0CW18 603 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 LIPCP11150 499 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 SLC2A4P14672 509 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 AKT1P31749 480 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 CSTF2P33240 577 aaKnown RBP eCLIP17.41■□□□□ 0.38
PNKP-230ENST00000638016 TRA2AQ13595 282 aaKnown RBP eCLIP17.41■□□□□ 0.38
PNKP-230ENST00000638016 ZDHHC20Q5W0Z9 365 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 ANKS6Q68DC2 871 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 INO80CQ6PI98 192 aaPredicted RBP17.41■□□□□ 0.38
PNKP-230ENST00000638016 ABRAXAS1Q6UWZ7 409 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 ARHGEF18Q6ZSZ5 1173 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 TMEM26Q6ZUK4 368 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 TRIM48Q8IWZ4 208 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 KLHDC8BQ8IXV7 354 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 AGBL5Q8NDL9 886 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 RSC1A1Q92681 617 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 SGF29Q96ES7 293 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 TTC25Q96NG3 672 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 CTRCQ99895 268 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 FERMT1Q9BQL6 677 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 ASB8Q9H765 288 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 SMOXQ9NWM0 555 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 AKAP7Q9P0M2 348 aaPredicted RBP17.41■□□□□ 0.38
PNKP-230ENST00000638016 PDP2Q9P2J9 529 aa17.41■□□□□ 0.38
PNKP-230ENST00000638016 TEX51A0A1B0GUA7 166 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 CCDC78A2IDD5 438 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 GOLGA6L9A6NEM1 432 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 LILRA5A6NI73 299 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 OR5K4A6NMS3 321 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 C2orf81A6NN90 581 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 ATXN7O15265 892 aaPredicted RBP17.4■□□□□ 0.38
PNKP-230ENST00000638016 LDB2O43679 373 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 SGTAO43765 313 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 XRCC1P18887 633 aaPredicted RBP17.4■□□□□ 0.38
PNKP-230ENST00000638016 IDSP22304 550 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 LEPRP48357 1165 aaKnown RBP17.4■□□□□ 0.38
PNKP-230ENST00000638016 CDKN1CP49918 316 aaPredicted RBP17.4■□□□□ 0.38
PNKP-230ENST00000638016 EPHA4P54764 986 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 UCNP55089 124 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 ITGA9Q13797 1035 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 GPR18Q14330 331 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 LDLRAP1Q5SW96 308 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 FNBP1LQ5T0N5 605 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 DUS1LQ6P1R4 473 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms