RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 DENND5AQ6IQ26 1287 aa17.68■□□□□ 0.42
SCAMP4-213ENST00000621748 TMEM71Q6P5X7 295 aa17.68■□□□□ 0.42
SCAMP4-213ENST00000621748 TTC13Q8NBP0 860 aa17.68■□□□□ 0.42
SCAMP4-213ENST00000621748 OR10G6Q8NH81 332 aa17.68■□□□□ 0.42
SCAMP4-213ENST00000621748 PBKQ96KB5 322 aa17.68■□□□□ 0.42
SCAMP4-213ENST00000621748 NAPGQ99747 312 aaPredicted RBP17.68■□□□□ 0.42
SCAMP4-213ENST00000621748 TIMM29Q9BSF4 260 aa17.68■□□□□ 0.42
SCAMP4-213ENST00000621748 FOXJ2Q9P0K8 574 aa17.68■□□□□ 0.42
SCAMP4-213ENST00000621748 ZNF624Q9P2J8 865 aaPredicted RBP17.68■□□□□ 0.42
SCAMP4-213ENST00000621748 PDP2Q9P2J9 529 aa17.68■□□□□ 0.42
SCAMP4-213ENST00000621748 ACSL6Q9UKU0 697 aa17.68■□□□□ 0.42
SCAMP4-213ENST00000621748 KCTD3Q9Y597 815 aa17.68■□□□□ 0.42
SCAMP4-213ENST00000621748 ZNF106Q9H2Y7 1883 aaKnown RBP17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 ATMQ13315 3056 aa17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 FGF3P11487 239 aaPredicted RBP17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 BRAFP15056 766 aa17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 LPOP22079 712 aaPredicted RBP17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 SLC19A1P41440 591 aa17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 UCNP55089 124 aa17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 SPARCL1Q14515 664 aa17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 TAF1AQ15573 450 aaPredicted RBP17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 TGIF1Q15583 401 aa17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 SEPT7Q16181 437 aaKnown RBP17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 GPRC6AQ5T6X5 926 aa17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 ARHGAP40Q5TG30 622 aa17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 TRAPPC5Q8IUR0 188 aa17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 KLHDC8BQ8IXV7 354 aa17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 RASGEF1AQ8N9B8 481 aa17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 FAM71DQ8N9W8 422 aa17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 DDHD1Q8NEL9 900 aa17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 OR4K2Q8NGD2 314 aa17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 BRSK1Q8TDC3 778 aa17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 MAIP1Q8WWC4 291 aa17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 SH3KBP1Q96B97 665 aa17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 NAP1L3Q99457 506 aaPredicted RBP17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 DPYSL5Q9BPU6 564 aa17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 TBC1D10AQ9BXI6 508 aa17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 STN1Q9H668 368 aaKnown RBP17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 AKAP7Q9P0M2 348 aaPredicted RBP17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 ATRXP46100 2492 aa17.67■□□□□ 0.42
SCAMP4-213ENST00000621748 SDK2Q58EX2 2172 aa17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 C2orf81A6NN90 581 aa17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 DUX1O43812 170 aa17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 CEP104O60308 925 aa17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 XRCC1P18887 633 aaPredicted RBP17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 RPL10P27635 214 aaKnown RBP17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 PPM1FP49593 454 aaPredicted RBP17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 CTSCP53634 463 aa17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 DRG2P55039 364 aaKnown RBP17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 GDF10P55107 478 aa17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 ETF1P62495 437 aaKnown RBP17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 ITGA9Q13797 1035 aa17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 GTF2H3Q13889 308 aa17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 LDLRAP1Q5SW96 308 aa17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 WDR74Q6RFH5 385 aaPredicted RBP17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 ABRAXAS1Q6UWZ7 409 aa17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 SLC35B2Q8TB61 432 aa17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 ZNF398Q8TD17 642 aa17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 NCSTNQ92542 709 aa17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 TTC25Q96NG3 672 aa17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 UBL7Q96S82 380 aaPredicted RBP17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 TBL1YQ9BQ87 522 aa17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 ARNT2Q9HBZ2 717 aa17.66■□□□□ 0.42
SCAMP4-213ENST00000621748 TEX51A0A1B0GUA7 166 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 A8MU76 341 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 PDZK1P1A8MUH7 402 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 EFSO43281 561 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 PRAMEF1O95521 474 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 METTL18O95568 372 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 TCP1P17987 556 aaKnown RBP17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 CSTF2P33240 577 aaKnown RBP eCLIP17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 MAPK9P45984 424 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 EPHA4P54764 986 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 VAC14Q08AM6 782 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 PARP6Q2NL67 630 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 SNAP47Q5SQN1 464 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 KCTD11Q693B1 232 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 TMEM220Q6QAJ8 160 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 WASH2PQ6VEQ5 465 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 ZFAND4Q86XD8 727 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 AGBL5Q8NDL9 886 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 OR13C4Q8NGS5 318 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 ZNF592Q92610 1267 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 PMEPA1Q969W9 287 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 C16orf45Q96MC5 204 aaPredicted RBP17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 TMEM121Q9BTD3 319 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 ZMYND15Q9H091 742 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 WASH6PQ9NQA3 447 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 SMOXQ9NWM0 555 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 OCIAD1Q9NX40 245 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 FKBPLQ9UIM3 349 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 WDR37Q9Y2I8 494 aa17.65■□□□□ 0.42
SCAMP4-213ENST00000621748 LILRA5A6NI73 299 aa17.64■□□□□ 0.41
SCAMP4-213ENST00000621748 OR2AG2A6NM03 316 aa17.64■□□□□ 0.41
SCAMP4-213ENST00000621748 OR52A4PA6NMU1 304 aa17.64■□□□□ 0.41
SCAMP4-213ENST00000621748 POP7O75817 140 aaKnown RBP17.64■□□□□ 0.41
SCAMP4-213ENST00000621748 ZNF189O75820 626 aaPredicted RBP17.64■□□□□ 0.41
SCAMP4-213ENST00000621748 VIPP01282 170 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms