RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 MROQ9BYG7 248 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 TMEM30AQ9NV96 361 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 FAM118AQ9NWS6 357 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 TMEM9Q9P0T7 183 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 FER1L6Q2WGJ9 1857 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 PCM1Q15154 2024 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 ARVCFO00192 962 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 LGALS2P05162 132 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 HTR1AP08908 422 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 IFI30P13284 250 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 PSMD8P48556 350 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 ALDH3A2P51648 485 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 DAB2P98082 770 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 DSC2Q02487 901 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 TSNQ15631 228 aaKnown RBP13.04□□□□□ -0.32
MSH6-214ENST00000616033 DENND5AQ6IQ26 1287 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 FRA10AC1Q70Z53 315 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 FBXO39Q8N4B4 442 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 TTC39CQ8N584 583 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 ADAMTS16Q8TE57 1224 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 KLRG1Q96E93 195 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 AURKBQ96GD4 344 aaPredicted RBP13.04□□□□□ -0.32
MSH6-214ENST00000616033 AMBRA1Q9C0C7 1298 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 ROGDIQ9GZN7 287 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 GDAP2Q9NXN4 497 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 RCOR3Q9P2K3 495 aaPredicted RBP13.04□□□□□ -0.32
MSH6-214ENST00000616033 ADGRE2Q9UHX3 823 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 FBXW11Q9UKB1 542 aa13.04□□□□□ -0.32
MSH6-214ENST00000616033 ASNA1O43681 348 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 GAS2O43903 313 aaKnown RBP13.03□□□□□ -0.32
MSH6-214ENST00000616033 HSD17B1P14061 328 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 TAF6P49848 677 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 GP2P55259 537 aaKnown RBP13.03□□□□□ -0.32
MSH6-214ENST00000616033 HERVK_113P63132 956 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 CLPPQ16740 277 aaPredicted RBP13.03□□□□□ -0.32
MSH6-214ENST00000616033 SULT1C3Q6IMI6 304 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 BLOC1S3Q6QNY0 202 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 GCNT7Q6ZNI0 430 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 C11orf74Q86VG3 221 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 MINDY1Q8N5J2 469 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 CHDHQ8NE62 594 aaPredicted RBP13.03□□□□□ -0.32
MSH6-214ENST00000616033 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.03□□□□□ -0.32
MSH6-214ENST00000616033 ERVK-6Q9BXR3 956 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 NTN4Q9HB63 628 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 ZFP14Q9HCL3 533 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 PCDHA9Q9Y5H5 950 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 RAD51BO15315 384 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 CYP7B1O75881 506 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 RECQL5O94762 991 aaPredicted RBP13.03□□□□□ -0.32
MSH6-214ENST00000616033 PGLSO95336 258 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 RPS12P25398 132 aaKnown RBP13.03□□□□□ -0.32
MSH6-214ENST00000616033 DNAJB13P59910 316 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 EMX1Q04741 257 aaPredicted RBP13.03□□□□□ -0.32
MSH6-214ENST00000616033 GALNT3Q14435 633 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 FSCN1Q16658 493 aaKnown RBP13.03□□□□□ -0.32
MSH6-214ENST00000616033 DGUOKQ16854 277 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 PRMT9Q6P2P2 845 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 PLEKHG7Q6ZR37 379 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 KIAA0408Q6ZU52 694 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 DET1Q7L5Y6 550 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 SLC22A15Q8IZD6 547 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 ZNF540Q8NDQ6 660 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 FAM83FQ8NEG4 500 aaPredicted RBP13.03□□□□□ -0.32
MSH6-214ENST00000616033 CHST13Q8NET6 341 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 MCFD2Q8NI22 146 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 SMOC2Q9H3U7 446 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 CARS2Q9HA77 564 aaKnown RBP13.03□□□□□ -0.32
MSH6-214ENST00000616033 PAK1IP1Q9NWT1 392 aaPredicted RBP13.03□□□□□ -0.32
MSH6-214ENST00000616033 ARL5AQ9Y689 179 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 LAMA3Q16787 3333 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 SMIM28A0A1B0GU29 152 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 A0A1W2PP18 115 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 ZNF99A8MXY4 864 aaPredicted RBP13.03□□□□□ -0.32
MSH6-214ENST00000616033 CDC7O00311 574 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 FFAR3O14843 346 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 GPR42O15529 346 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 PRKD3O94806 890 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 RHOBTB1O94844 696 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 OR4F21O95013 312 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 ANGPTL1O95841 491 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 MYCP01106 439 aaPredicted RBP13.03□□□□□ -0.32
MSH6-214ENST00000616033 DNTTP04053 509 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 PHC1P78364 1004 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 SLC16A12Q6ZSM3 486 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 TAC4Q86UU9 113 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 OR13C4Q8NGS5 318 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 SCAMP5Q8TAC9 235 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 TSPAN17Q96FV3 270 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 SMIM14Q96QK8 99 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 ASPSCR1Q9BZE9 553 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 WDR12Q9GZL7 423 aaKnown RBP13.03□□□□□ -0.32
MSH6-214ENST00000616033 TLR9Q9NR96 1032 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 ITGB1BP2Q9UKP3 347 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 SNX8Q9Y5X2 465 aa13.03□□□□□ -0.32
MSH6-214ENST00000616033 BRCA2P51587 3418 aa13.02□□□□□ -0.32
MSH6-214ENST00000616033 ASPDHA6ND91 283 aa13.02□□□□□ -0.32
MSH6-214ENST00000616033 BTN3A1O00481 513 aa13.02□□□□□ -0.32
MSH6-214ENST00000616033 NCAM2O15394 837 aa13.02□□□□□ -0.32
MSH6-214ENST00000616033 MTSS1O43312 755 aa13.02□□□□□ -0.32
MSH6-214ENST00000616033 ZNF682O95780 498 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms