RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 GANCQ8TET4 914 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 ASB12Q8WXK4 309 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 ALKBH8Q96BT7 664 aaKnown RBP11.32□□□□□ -0.6
SLIRP-212ENST00000613856 AP2M1Q96CW1 435 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 CABS1Q96KC9 395 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 NUSAP1Q9BXS6 441 aaKnown RBP11.32□□□□□ -0.6
SLIRP-212ENST00000613856 ABCG8Q9H221 673 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 SLC32A1Q9H598 525 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 CD93Q9NPY3 652 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-212ENST00000613856 CRLS1Q9UJA2 301 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 PILRBQ9UKJ0 227 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 FNDC3AQ9Y2H6 1198 aaKnown RBP11.32□□□□□ -0.6
SLIRP-212ENST00000613856 RAXQ9Y2V3 346 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 MTO1Q9Y2Z2 717 aaKnown RBP11.32□□□□□ -0.6
SLIRP-212ENST00000613856 COMMD10Q9Y6G5 202 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 ACACAQ13085 2346 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 A0A1W2PPM1 405 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 PRMT5O14744 637 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-212ENST00000613856 TPP1O14773 563 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 GPR39O43194 453 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 LZTS3O60299 673 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-212ENST00000613856 TM7SF2O76062 418 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 PCDH8O95206 1070 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 ESR1P03372 595 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 F7P08709 466 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-212ENST00000613856 ZNF7P17097 686 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-212ENST00000613856 CD9P21926 228 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 ABCG1P45844 678 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 TPMTP51580 245 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 ATP13A5Q4VNC0 1218 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 SLC23A3Q6PIS1 610 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 LPCAT2Q7L5N7 544 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 TAS2R42Q7RTR8 314 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 CCDC91Q7Z6B0 441 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 HORMAD1Q86X24 394 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 MINDY1Q8N5J2 469 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 DDHD1Q8NEL9 900 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 HEXDCQ8WVB3 486 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 HMGB4Q8WW32 186 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 SCAMP4Q969E2 229 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 SERAC1Q96JX3 654 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 SMC6Q96SB8 1091 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 AARSD1Q9BTE6 412 aaKnown RBP11.31□□□□□ -0.6
SLIRP-212ENST00000613856 RIOK2Q9BVS4 552 aaKnown RBP11.31□□□□□ -0.6
SLIRP-212ENST00000613856 SPATA16Q9BXB7 569 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 C1QTNF2Q9BXJ5 285 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 P2RY12Q9H244 342 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 FAM96AQ9H5X1 160 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 POPDC3Q9HBV1 291 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 SGK2Q9HBY8 427 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 ITM2CQ9NQX7 267 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 SNX15Q9NRS6 342 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 ZDHHC3Q9NYG2 299 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 OGFRQ9NZT2 677 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 CD84Q9UIB8 345 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 COQ6Q9Y2Z9 468 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 PCDHB1Q9Y5F3 818 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 ASXL3Q9C0F0 2248 aa11.31□□□□□ -0.6
SLIRP-212ENST00000613856 ASH1LQ9NR48 2969 aaKnown RBP11.3□□□□□ -0.6
SLIRP-212ENST00000613856 IGLON5A6NGN9 336 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 FADS2P1A8MWK0 482 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 H3BMM5 538 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 PRPF4O43172 522 aaKnown RBP eCLIP11.3□□□□□ -0.6
SLIRP-212ENST00000613856 SH3BP5O60239 455 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 RNGTTO60942 597 aaKnown RBP11.3□□□□□ -0.6
SLIRP-212ENST00000613856 SOD1P00441 154 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 MPOP05164 745 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 KRT4P19013 534 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 UGT1A6P19224 532 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 NR1D1P20393 614 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 UGT1A1P22309 533 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 UGT1A4P22310 534 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 FDXRP22570 491 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 CRABP2P29373 138 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 CA5AP35218 305 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 UGT1A3P35503 534 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 UGT1A5P35504 534 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 NSG1P42857 185 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 SLC18A1P54219 525 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 PPP2R2AP63151 447 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 SETMARQ53H47 684 aaPredicted RBP11.3□□□□□ -0.6
SLIRP-212ENST00000613856 LDLRAP1Q5SW96 308 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 RBM20Q5T481 1227 aaKnown RBP11.3□□□□□ -0.6
SLIRP-212ENST00000613856 GPRC6AQ5T6X5 926 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 HECTD2Q5U5R9 776 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 PEAR1Q5VY43 1037 aaPredicted RBP11.3□□□□□ -0.6
SLIRP-212ENST00000613856 LYSMD4Q5XG99 296 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 ZNF549Q6P9A3 640 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 LCA5Q86VQ0 697 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 TRIM69Q86WT6 500 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 SLC41A1Q8IVJ1 513 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 ARFGAP2Q8N6H7 521 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 GPATCH11Q8N954 259 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 OR2T34Q8NGX1 318 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 OR14C36Q8NHC7 312 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 BTN2A2Q8WVV5 523 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 GLYATL1Q969I3 302 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 TSPAN17Q96FV3 270 aa11.3□□□□□ -0.6
SLIRP-212ENST00000613856 ATXN7L3BQ96GX2 97 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms