RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 GSNP06396 782 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 ADH1AP07327 375 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 ALPIP09923 528 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 LAG3P18627 525 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 SPAM1P38567 509 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 RPIAP49247 311 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 CCT8P50990 548 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 PLEKHG6Q3KR16 790 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 GRAMD4Q6IC98 578 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 CHSY3Q70JA7 882 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 CLHC1Q8NHS4 586 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 BBS2Q9BXC9 721 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 NOL6Q9H6R4 1146 aaKnown RBP6.3□□□□□ -1.4
SNX13-213ENST00000611725 ELAC1Q9H777 363 aaKnown RBP6.3□□□□□ -1.4
SNX13-213ENST00000611725 MEAF6Q9HAF1 191 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 ASAH2Q9NR71 780 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 TBC1D23Q9NUY8 699 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 NLE1Q9NVX2 485 aaPredicted RBP6.3□□□□□ -1.4
SNX13-213ENST00000611725 A0A1W2PQ45 241 aaPredicted RBP6.3□□□□□ -1.4
SNX13-213ENST00000611725 A0A1W2PQY0 241 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 MGAT4DA6NG13 374 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 M0R3G1 203 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 STX16O14662 325 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 FFAR2O15552 330 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 PARNO95453 639 aaKnown RBP6.3□□□□□ -1.4
SNX13-213ENST00000611725 MTHFD1P11586 935 aaKnown RBP6.3□□□□□ -1.4
SNX13-213ENST00000611725 HMGCS1Q01581 520 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 C11orf91Q3C1V1 193 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 MPPE1Q53F39 396 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 PIGGQ5H8A4 983 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 TMEM214Q6NUQ4 689 aaKnown RBP6.3□□□□□ -1.4
SNX13-213ENST00000611725 ABRAXAS1Q6UWZ7 409 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 SYT12Q8IV01 421 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 PIANPQ8IYJ0 282 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 ZBTB2Q8N680 514 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 EEF1AKMT1Q8WVE0 214 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 LRRC58Q96CX6 371 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 CGREF1Q99674 301 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 OSBPL6Q9BZF3 934 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 FAM83DQ9H4H8 585 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 GSTO2Q9H4Y5 243 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 LRTM1Q9HBL6 345 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.3□□□□□ -1.4
SNX13-213ENST00000611725 IL17CQ9P0M4 197 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 SLC25A13Q9UJS0 675 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 KLHL33A6NCF5 533 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 TMEM247A6NEH6 219 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 EI24O14681 340 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 COCHO43405 550 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 SH3BGRLO75368 114 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 TRMUO75648 421 aaKnown RBP6.3□□□□□ -1.4
SNX13-213ENST00000611725 KCNH1O95259 989 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 KIR3DL1P43629 444 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 PRIM2P49643 509 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 CLCN4P51793 760 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 C16orf87Q6PH81 154 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 CHST9Q7L1S5 443 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 PACRGLQ8N7B6 248 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 OR2AP1Q8NGE2 309 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 ELMO1Q92556 727 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 OR52E6Q96RD3 313 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 CORO1BQ9BR76 489 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 ATG10Q9H0Y0 220 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 ABCG8Q9H221 673 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 KCTD5Q9NXV2 234 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 KIF17Q9P2E2 1029 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 SPASTQ9UBP0 616 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 FAM32AQ9Y421 112 aaKnown RBP6.3□□□□□ -1.4
SNX13-213ENST00000611725 FAM234BA2RU67 622 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 DRGXA6NNA5 263 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 H3BNX3 289 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 KDELR3O43731 214 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 STC2O76061 302 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 H6PDO95479 791 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 NCK1P16333 377 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 MZF1P28698 734 aaPredicted RBP6.3□□□□□ -1.4
SNX13-213ENST00000611725 PLCL1Q15111 1095 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 PGS1Q32NB8 556 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 FAM174BQ3ZCQ3 159 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 RETREG3Q86VR2 466 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 ATL1Q8WXF7 558 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 PLEKHG4BQ96PX9 1271 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 CDK15Q96Q40 435 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 TSEN34Q9BSV6 310 aaKnown RBP6.3□□□□□ -1.4
SNX13-213ENST00000611725 TNKS2Q9H2K2 1166 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 ACTR3BQ9P1U1 418 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 SNX6Q9UNH7 406 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 KCNE2Q9Y6J6 123 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 CPSF4O95639 269 aaKnown RBP6.3□□□□□ -1.4
SNX13-213ENST00000611725 NTRK1P04629 796 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 ATXN1LP0C7T5 689 aaKnown RBP6.3□□□□□ -1.4
SNX13-213ENST00000611725 PRSS56P0CW18 603 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 CAPN3P20807 821 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 NSG1P42857 185 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 RGRP47804 291 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 PPP3CCP48454 512 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 RPL26P61254 145 aaKnown RBP6.3□□□□□ -1.4
SNX13-213ENST00000611725 GRB7Q14451 532 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 TLR1Q15399 786 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 BNIPLQ7Z465 357 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms