RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 DET1Q7L5Y6 550 aa16.58■□□□□ 0.24
TRIM28-215ENST00000601150 TAS2R42Q7RTR8 314 aa16.58■□□□□ 0.24
TRIM28-215ENST00000601150 SERPINA9Q86WD7 417 aa16.58■□□□□ 0.24
TRIM28-215ENST00000601150 AVL9Q8NBF6 648 aa16.58■□□□□ 0.24
TRIM28-215ENST00000601150 OR13J1Q8NGT2 312 aa16.58■□□□□ 0.24
TRIM28-215ENST00000601150 PEX13Q92968 403 aa16.58■□□□□ 0.24
TRIM28-215ENST00000601150 GRAMD1AQ96CP6 724 aa16.58■□□□□ 0.24
TRIM28-215ENST00000601150 NXPE2Q96DL1 559 aa16.58■□□□□ 0.24
TRIM28-215ENST00000601150 SGF29Q96ES7 293 aa16.58■□□□□ 0.24
TRIM28-215ENST00000601150 CAPZA3Q96KX2 299 aa16.58■□□□□ 0.24
TRIM28-215ENST00000601150 NRSN2Q9GZP1 204 aa16.58■□□□□ 0.24
TRIM28-215ENST00000601150 IL22Q9GZX6 179 aa16.58■□□□□ 0.24
TRIM28-215ENST00000601150 STN1Q9H668 368 aaKnown RBP16.58■□□□□ 0.24
TRIM28-215ENST00000601150 SARS2Q9NP81 518 aaKnown RBP16.58■□□□□ 0.24
TRIM28-215ENST00000601150 BFARQ9NZS9 450 aa16.58■□□□□ 0.24
TRIM28-215ENST00000601150 PIKFYVEQ9Y2I7 2098 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 IGLV3-16A0A075B6K0 115 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 TCRBV7S3A2A0A539 114 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 KLHL33A6NCF5 533 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 PDZK1P1A8MUH7 402 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 D6RAR5 112 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 B4GAT1O43505 415 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 ACRV1P26436 265 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 ALDH4A1P30038 563 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 TERF1P54274 439 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 OR1D5P58170 312 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 DMPKQ09013 629 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 BCL7AQ4VC05 210 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.57■□□□□ 0.24
TRIM28-215ENST00000601150 AGAP9Q5VTM2 703 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 AFTPHQ6ULP2 937 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 ABRAXAS1Q6UWZ7 409 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 WASH2PQ6VEQ5 465 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 MICALCLQ6ZW33 695 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 SLC9B2Q86UD5 537 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 CREG2Q8IUH2 290 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 C17orf53Q8N3J3 647 aaPredicted RBP16.57■□□□□ 0.24
TRIM28-215ENST00000601150 HDAC10Q969S8 669 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 DDX47Q9H0S4 455 aaKnown RBP16.57■□□□□ 0.24
TRIM28-215ENST00000601150 CCDC86Q9H6F5 360 aaKnown RBP16.57■□□□□ 0.24
TRIM28-215ENST00000601150 WASH6PQ9NQA3 447 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 SLC2A6Q9UGQ3 507 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 PCDHB1Q9Y5F3 818 aa16.57■□□□□ 0.24
TRIM28-215ENST00000601150 TPRP12270 2363 aaKnown RBP16.57■□□□□ 0.24
TRIM28-215ENST00000601150 PRSS56P0CW18 603 aa16.56■□□□□ 0.24
TRIM28-215ENST00000601150 ATP1B2P14415 290 aaPredicted RBP16.56■□□□□ 0.24
TRIM28-215ENST00000601150 PBLDP30039 288 aaPredicted RBP16.56■□□□□ 0.24
TRIM28-215ENST00000601150 FOXN2P32314 431 aa16.56■□□□□ 0.24
TRIM28-215ENST00000601150 PAFAH1B1P43034 410 aa16.56■□□□□ 0.24
TRIM28-215ENST00000601150 PRAMEP78395 509 aa16.56■□□□□ 0.24
TRIM28-215ENST00000601150 CRADDP78560 199 aa16.56■□□□□ 0.24
TRIM28-215ENST00000601150 HHEXQ03014 270 aa16.56■□□□□ 0.24
TRIM28-215ENST00000601150 RTP5Q14D33 572 aa16.56■□□□□ 0.24
TRIM28-215ENST00000601150 PPP1R7Q15435 360 aa16.56■□□□□ 0.24
TRIM28-215ENST00000601150 SEPT7Q16181 437 aaKnown RBP16.56■□□□□ 0.24
TRIM28-215ENST00000601150 DBN1Q16643 649 aa16.56■□□□□ 0.24
TRIM28-215ENST00000601150 ZNF534Q76KX8 674 aa16.56■□□□□ 0.24
TRIM28-215ENST00000601150 PIANPQ8IYJ0 282 aa16.56■□□□□ 0.24
TRIM28-215ENST00000601150 BEND7Q8N7W2 519 aaPredicted RBP16.56■□□□□ 0.24
TRIM28-215ENST00000601150 KDF1Q8NAX2 398 aaPredicted RBP16.56■□□□□ 0.24
TRIM28-215ENST00000601150 ZCCHC14Q8WYQ9 949 aaKnown RBP16.56■□□□□ 0.24
TRIM28-215ENST00000601150 CPT1BQ92523 772 aa16.56■□□□□ 0.24
TRIM28-215ENST00000601150 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.56■□□□□ 0.24
TRIM28-215ENST00000601150 SH3KBP1Q96B97 665 aa16.56■□□□□ 0.24
TRIM28-215ENST00000601150 CCDC97Q96F63 343 aaPredicted RBP16.56■□□□□ 0.24
TRIM28-215ENST00000601150 ZNF778Q96MU6 729 aa16.56■□□□□ 0.24
TRIM28-215ENST00000601150 SLC38A3Q99624 504 aa16.56■□□□□ 0.24
TRIM28-215ENST00000601150 CHRAC1Q9NRG0 131 aa16.56■□□□□ 0.24
TRIM28-215ENST00000601150 CPNE7Q9UBL6 633 aa16.56■□□□□ 0.24
TRIM28-215ENST00000601150 RNF14Q9UBS8 474 aa16.56■□□□□ 0.24
TRIM28-215ENST00000601150 ENTPD2Q9Y5L3 495 aa16.56■□□□□ 0.24
TRIM28-215ENST00000601150 MAP1BP46821 2468 aaKnown RBP16.55■□□□□ 0.24
TRIM28-215ENST00000601150 MGAT4DA6NG13 374 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 OR51F1A6NGY5 319 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 TMX2-CTNND1H3BSU7 103 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 FANCGO15287 622 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 SGTAO43765 313 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 GOT2P00505 430 aaKnown RBP16.55■□□□□ 0.24
TRIM28-215ENST00000601150 XRCC1P18887 633 aaPredicted RBP16.55■□□□□ 0.24
TRIM28-215ENST00000601150 MGAT1P26572 445 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 RPL10P27635 214 aaKnown RBP16.55■□□□□ 0.24
TRIM28-215ENST00000601150 HALP42357 657 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 PRLHRP49683 370 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 PDX1P52945 283 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 ITIH4Q14624 930 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 CLPPQ16740 277 aaPredicted RBP16.55■□□□□ 0.24
TRIM28-215ENST00000601150 AMZ1Q400G9 498 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 MAP9Q49MG5 647 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 LYPLAL1Q5VWZ2 237 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 ANKRD22Q5VYY1 191 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 TRIM48Q8IWZ4 208 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 OR6P1Q8NGX9 317 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 OR2L2Q8NH16 312 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 OR4L1Q8NH43 312 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 NAT14Q8WUY8 206 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 SLCO2A1Q92959 643 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 ATXN7L3BQ96GX2 97 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 SGSM3Q96HU1 749 aa16.55■□□□□ 0.24
TRIM28-215ENST00000601150 LINC00615Q96LM1 132 aaPredicted RBP16.55■□□□□ 0.24
TRIM28-215ENST00000601150 TMEM74Q96NL1 305 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms