RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 UGT1A7Q9HAW7 530 aa15.94■□□□□ 0.14
LSM4-206ENST00000600289 UGT1A10Q9HAW8 530 aa15.94■□□□□ 0.14
LSM4-206ENST00000600289 UGT1A8Q9HAW9 530 aa15.94■□□□□ 0.14
LSM4-206ENST00000600289 TBC1D29Q9UFV1 150 aa15.94■□□□□ 0.14
LSM4-206ENST00000600289 PIKFYVEQ9Y2I7 2098 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 IGLV3-16A0A075B6K0 115 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 ZW10O43264 779 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 PHF2O75151 1096 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 TPH1P17752 444 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 ADRA1DP25100 572 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 COILP38432 576 aaPredicted RBP15.93■□□□□ 0.14
LSM4-206ENST00000600289 FNTAP49354 379 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 MAZP56270 477 aaKnown RBP15.93■□□□□ 0.14
LSM4-206ENST00000600289 B4GALNT1Q00973 533 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 ACVR1Q04771 509 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 SPIDRQ14159 915 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 ISXQ2M1V0 245 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.93■□□□□ 0.14
LSM4-206ENST00000600289 AGAP9Q5VTM2 703 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 ARMC3Q5W041 872 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 PAPD7Q5XG87 772 aaKnown RBP15.93■□□□□ 0.14
LSM4-206ENST00000600289 CRTC3Q6UUV7 619 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 WASH2PQ6VEQ5 465 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 PPP1R21Q6ZMI0 780 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 NLRP9Q7RTR0 991 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 CCNJLQ8IV13 435 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 NXPE1Q8N323 547 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 SLC37A2Q8TED4 501 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 HEXDCQ8WVB3 486 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 MAGOHBQ96A72 148 aaKnown RBP15.93■□□□□ 0.14
LSM4-206ENST00000600289 NXPE2Q96DL1 559 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 CDKN2AIPNLQ96HQ2 116 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 TTC25Q96NG3 672 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 LRRN3Q9H3W5 708 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 SARS2Q9NP81 518 aaKnown RBP15.93■□□□□ 0.14
LSM4-206ENST00000600289 WASH6PQ9NQA3 447 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 PIH1D1Q9NWS0 290 aaKnown RBP15.93■□□□□ 0.14
LSM4-206ENST00000600289 SLC23A2Q9UGH3 650 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 KCNK6Q9Y257 313 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 NEU2Q9Y3R4 380 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 TEX15Q9BXT5 2789 aa15.93■□□□□ 0.14
LSM4-206ENST00000600289 USP9XQ93008 2570 aaPredicted RBP15.93■□□□□ 0.14
LSM4-206ENST00000600289 KIR2DS5A0A0G2JLQ3 304 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 A0A0G2JNG1 304 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 GOLGA6L10A0A0M3HER8 536 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 A0A1W2PQM1 296 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 D6RAR5 112 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 PYCARD-AS1I3L0S3 204 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 KIR2DS3K7RE56 304 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 CSO75390 466 aaKnown RBP15.92■□□□□ 0.14
LSM4-206ENST00000600289 EML2O95834 649 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 RPLP0P05388 317 aaKnown RBP15.92■□□□□ 0.14
LSM4-206ENST00000600289 VCLP18206 1134 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 MSH3P20585 1137 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 MC4RP32245 332 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 GRIA1P42261 906 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 PDX1P52945 283 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 GNG11P61952 73 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 BASP1P80723 227 aaKnown RBP15.92■□□□□ 0.14
LSM4-206ENST00000600289 CFHR1Q03591 330 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 SQSTM1Q13501 440 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 SEPT6Q14141 434 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 KIR2DS5Q14953 304 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 INSCQ1MX18 579 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 SKIDA1Q1XH10 827 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 BCL7AQ4VC05 210 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 IYDQ6PHW0 289 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 CCDC137Q6PK04 289 aaKnown RBP15.92■□□□□ 0.14
LSM4-206ENST00000600289 TRAPPC5Q8IUR0 188 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 PATE1Q8WXA2 126 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 LINC00615Q96LM1 132 aaPredicted RBP15.92■□□□□ 0.14
LSM4-206ENST00000600289 GFM1Q96RP9 751 aaKnown RBP15.92■□□□□ 0.14
LSM4-206ENST00000600289 AP1M1Q9BXS5 423 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 KLC4Q9NSK0 619 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 CRLS1Q9UJA2 301 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 SLC30A1Q9Y6M5 507 aa15.92■□□□□ 0.14
LSM4-206ENST00000600289 UNC13CQ8NB66 2214 aa15.91■□□□□ 0.14
LSM4-206ENST00000600289 RHPN2P1A8MT19 583 aa15.91■□□□□ 0.14
LSM4-206ENST00000600289 TMX2-CTNND1H3BSU7 103 aa15.91■□□□□ 0.14
LSM4-206ENST00000600289 RALBP11234 206 aa15.91■□□□□ 0.14
LSM4-206ENST00000600289 AKT1P31749 480 aa15.91■□□□□ 0.14
LSM4-206ENST00000600289 CCKBRP32239 447 aa15.91■□□□□ 0.14
LSM4-206ENST00000600289 CTSCP53634 463 aa15.91■□□□□ 0.14
LSM4-206ENST00000600289 CCL7P80098 99 aa15.91■□□□□ 0.14
LSM4-206ENST00000600289 TMPRSS15P98073 1019 aa15.91■□□□□ 0.14
LSM4-206ENST00000600289 CACNG1Q06432 222 aa15.91■□□□□ 0.14
LSM4-206ENST00000600289 KCNJ11Q14654 390 aa15.91■□□□□ 0.14
LSM4-206ENST00000600289 TSTD2Q5T7W7 516 aa15.91■□□□□ 0.14
LSM4-206ENST00000600289 IGF2-ASQ6U949 168 aa15.91■□□□□ 0.14
LSM4-206ENST00000600289 ABRAXAS1Q6UWZ7 409 aa15.91■□□□□ 0.14
LSM4-206ENST00000600289 OR13J1Q8NGT2 312 aa15.91■□□□□ 0.14
LSM4-206ENST00000600289 GRK7Q8WTQ7 553 aa15.91■□□□□ 0.14
LSM4-206ENST00000600289 SGSM3Q96HU1 749 aa15.91■□□□□ 0.14
LSM4-206ENST00000600289 FCRL3Q96P31 734 aaPredicted RBP15.91■□□□□ 0.14
LSM4-206ENST00000600289 COPS8Q99627 209 aa15.91■□□□□ 0.14
LSM4-206ENST00000600289 NAPGQ99747 312 aaPredicted RBP15.91■□□□□ 0.14
LSM4-206ENST00000600289 IL22Q9GZX6 179 aa15.91■□□□□ 0.14
LSM4-206ENST00000600289 STN1Q9H668 368 aaKnown RBP15.91■□□□□ 0.14
LSM4-206ENST00000600289 TCAF1Q9Y4C2 921 aa15.91■□□□□ 0.14
LSM4-206ENST00000600289 ENTPD2Q9Y5L3 495 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms