RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 IGLV3-16A0A075B6K0 115 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 CCDC78A2IDD5 438 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 TAF4O00268 1085 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 ZW10O43264 779 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 SGTAO43765 313 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 IDSP22304 550 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 CD1CP29017 333 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 ARSDP51689 593 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 CDK16Q00536 496 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 HHEXQ03014 270 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 ACVR1Q04771 509 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 DMPKQ09013 629 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 SQSTM1Q13501 440 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 FNBP1LQ5T0N5 605 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 TSTD2Q5T7W7 516 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 PAPD7Q5XG87 772 aaKnown RBP16.45■□□□□ 0.22
SSBP4-204ENST00000597724 ABRAXAS1Q6UWZ7 409 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 WASH2PQ6VEQ5 465 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 DET1Q7L5Y6 550 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 B3GNT8Q7Z7M8 397 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 SLC9B2Q86UD5 537 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 PROSER1Q86XN7 944 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 OR13J1Q8NGT2 312 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 HEXDCQ8WVB3 486 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 CCDC97Q96F63 343 aaPredicted RBP16.45■□□□□ 0.22
SSBP4-204ENST00000597724 DCUN1D1Q96GG9 259 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 ZNF778Q96MU6 729 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 COPS8Q99627 209 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 WASH6PQ9NQA3 447 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 ZDHHC3Q9NYG2 299 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 ATXN7L1Q9ULK2 861 aaPredicted RBP16.45■□□□□ 0.22
SSBP4-204ENST00000597724 NEU2Q9Y3R4 380 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 TCAF1Q9Y4C2 921 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.45■□□□□ 0.22
SSBP4-204ENST00000597724 ACACAQ13085 2346 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 IGHV1OR21-1A0A087WYE8 117 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 A0A1W2PNU3 283 aaPredicted RBP16.44■□□□□ 0.22
SSBP4-204ENST00000597724 TCRBV7S3A2A0A539 114 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 AP3B1O00203 1094 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 PHF2O75151 1096 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 CPNE6O95741 557 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 PRSS56P0CW18 603 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 RALBP11234 206 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 BRAFP15056 766 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 XRCC1P18887 633 aaPredicted RBP16.44■□□□□ 0.22
SSBP4-204ENST00000597724 TPSB2P20231 275 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 ACRV1P26436 265 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 RPL10P27635 214 aaKnown RBP16.44■□□□□ 0.22
SSBP4-204ENST00000597724 MAGEA6P43360 314 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 LSSP48449 732 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 NPY2RP49146 381 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 CACNG1Q06432 222 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 GPS1Q13098 491 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 TPSAB1Q15661 275 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 CLPPQ16740 277 aaPredicted RBP16.44■□□□□ 0.22
SSBP4-204ENST00000597724 AMZ1Q400G9 498 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 BCL7AQ4VC05 210 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 AGAP9Q5VTM2 703 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 NLRP9Q7RTR0 991 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 TAS2R42Q7RTR8 314 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 TMPRSS9Q7Z410 1059 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 PIM3Q86V86 326 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 SERPINA9Q86WD7 417 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 PIANPQ8IYJ0 282 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 BEND7Q8N7W2 519 aaPredicted RBP16.44■□□□□ 0.22
SSBP4-204ENST00000597724 NAT14Q8WUY8 206 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 PEX13Q92968 403 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 HDAC10Q969S8 669 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 SH3KBP1Q96B97 665 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 STN1Q9H668 368 aaKnown RBP16.44■□□□□ 0.22
SSBP4-204ENST00000597724 POLR1BQ9H9Y6 1135 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 KCND1Q9NSA2 647 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 KCNK4Q9NYG8 393 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 CPNE7Q9UBL6 633 aa16.44■□□□□ 0.22
SSBP4-204ENST00000597724 GOLGA6L10A0A0M3HER8 536 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 CCDC162PA2VCL2 907 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 KLHL33A6NCF5 533 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 PDZK1P1A8MUH7 402 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 CFAP99D6REC4 459 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 MPOP05164 745 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 ATP1B2P14415 290 aaPredicted RBP16.43■□□□□ 0.22
SSBP4-204ENST00000597724 CCKBRP32239 447 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 SLC19A1P41440 591 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 FNTAP49354 379 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 VPS41P49754 854 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 DRG2P55039 364 aaKnown RBP16.43■□□□□ 0.22
SSBP4-204ENST00000597724 INHBCP55103 352 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 SESN2P58004 480 aaPredicted RBP16.43■□□□□ 0.22
SSBP4-204ENST00000597724 UBE2IP63279 158 aaKnown RBP16.43■□□□□ 0.22
SSBP4-204ENST00000597724 GPLD1P80108 840 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 ZFP36L1Q07352 338 aaKnown RBP16.43■□□□□ 0.22
SSBP4-204ENST00000597724 KCNJ11Q14654 390 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 SEPT7Q16181 437 aaKnown RBP16.43■□□□□ 0.22
SSBP4-204ENST00000597724 PCID2Q5JVF3 399 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 METRNLQ641Q3 311 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 FAM83HQ6ZRV2 1179 aaPredicted RBP16.43■□□□□ 0.22
SSBP4-204ENST00000597724 USP53Q70EK8 1073 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 ZNF534Q76KX8 674 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 ZNF761Q86XN6 746 aaPredicted RBP16.43■□□□□ 0.22
SSBP4-204ENST00000597724 SLITRK4Q8IW52 837 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms