RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 TAF8Q7Z7C8 310 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 LRRTM4Q86VH4 590 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 NRROSQ86YC3 692 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.05■□□□□ 0.64
PNKP-207ENST00000596014 SGF29Q96ES7 293 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 RTKNQ9BST9 563 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 BOCQ9BWV1 1114 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 FUT8Q9BYC5 575 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 GSDMCQ9BYG8 508 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 EPB41L5Q9HCM4 733 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 DLL3Q9NYJ7 618 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 MARCH4Q9P2E8 410 aaPredicted RBP19.05■□□□□ 0.64
PNKP-207ENST00000596014 GPR34Q9UPC5 381 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 DOLKQ9UPQ8 538 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 OR2AG2A6NM03 316 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 GOLGA8KD6RF30 607 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 E7ESA3 106 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 GOLGA8TH3BQL2 631 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 KMOO15229 486 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 SIGLEC6O43699 453 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 ALPPL2P10696 532 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 AK4P27144 223 aaPredicted RBP19.05■□□□□ 0.64
PNKP-207ENST00000596014 LYPLAL1Q5VWZ2 237 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 TMEM220Q6QAJ8 160 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 DET1Q7L5Y6 550 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 TRAPPC5Q8IUR0 188 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 CCNJLQ8IV13 435 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 DEFB124Q8NES8 71 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 NAT14Q8WUY8 206 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 SCG3Q8WXD2 468 aaKnown RBP19.05■□□□□ 0.64
PNKP-207ENST00000596014 ZNF514Q96K75 400 aaPredicted RBP19.05■□□□□ 0.64
PNKP-207ENST00000596014 WDR83Q9BRX9 315 aaKnown RBP19.05■□□□□ 0.64
PNKP-207ENST00000596014 DUSP23Q9BVJ7 150 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 CHMP2BQ9UQN3 213 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 FAM169AQ9Y6X4 670 aa19.05■□□□□ 0.64
PNKP-207ENST00000596014 COL5A1P20908 1838 aaPredicted RBP19.04■□□□□ 0.64
PNKP-207ENST00000596014 CFAP99D6REC4 459 aa19.04■□□□□ 0.64
PNKP-207ENST00000596014 TTC4O95801 387 aa19.04■□□□□ 0.64
PNKP-207ENST00000596014 ACP5P13686 325 aa19.04■□□□□ 0.64
PNKP-207ENST00000596014 ATP1B2P14415 290 aaPredicted RBP19.04■□□□□ 0.64
PNKP-207ENST00000596014 CSRP1P21291 193 aaKnown RBP19.04■□□□□ 0.64
PNKP-207ENST00000596014 ITIH4Q14624 930 aa19.04■□□□□ 0.64
PNKP-207ENST00000596014 SMAD1Q15797 465 aaKnown RBP19.04■□□□□ 0.64
PNKP-207ENST00000596014 AARS2Q5JTZ9 985 aaKnown RBP19.04■□□□□ 0.64
PNKP-207ENST00000596014 SLC30A9Q6PML9 568 aa19.04■□□□□ 0.64
PNKP-207ENST00000596014 CENPUQ71F23 418 aa19.04■□□□□ 0.64
PNKP-207ENST00000596014 C11orf96Q7Z7L8 435 aa19.04■□□□□ 0.64
PNKP-207ENST00000596014 LDB1Q86U70 411 aaPredicted RBP19.04■□□□□ 0.64
PNKP-207ENST00000596014 ANKMY2Q8IV38 441 aa19.04■□□□□ 0.64
PNKP-207ENST00000596014 BAHD1Q8TBE0 780 aaPredicted RBP19.04■□□□□ 0.64
PNKP-207ENST00000596014 TTC1Q99614 292 aa19.04■□□□□ 0.64
PNKP-207ENST00000596014 SLC32A1Q9H598 525 aa19.04■□□□□ 0.64
PNKP-207ENST00000596014 FAM114A2Q9NRY5 505 aa19.04■□□□□ 0.64
PNKP-207ENST00000596014 IL1RAPL1Q9NZN1 696 aa19.04■□□□□ 0.64
PNKP-207ENST00000596014 SLC23A2Q9UGH3 650 aa19.04■□□□□ 0.64
PNKP-207ENST00000596014 ZC3H7BQ9UGR2 993 aaKnown RBP19.04■□□□□ 0.64
PNKP-207ENST00000596014 SGTAO43765 313 aa19.03■□□□□ 0.64
PNKP-207ENST00000596014 NSG1P42857 185 aa19.03■□□□□ 0.64
PNKP-207ENST00000596014 CBX1P83916 185 aa19.03■□□□□ 0.64
PNKP-207ENST00000596014 CRYMQ14894 314 aa19.03■□□□□ 0.64
PNKP-207ENST00000596014 LONRF1Q17RB8 773 aa19.03■□□□□ 0.64
PNKP-207ENST00000596014 CLDN19Q8N6F1 224 aa19.03■□□□□ 0.64
PNKP-207ENST00000596014 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.03■□□□□ 0.64
PNKP-207ENST00000596014 FAM46DQ8NEK8 389 aa19.03■□□□□ 0.64
PNKP-207ENST00000596014 ZDHHC18Q9NUE0 388 aa19.03■□□□□ 0.64
PNKP-207ENST00000596014 ZNF7P17097 686 aaPredicted RBP19.02■□□□□ 0.64
PNKP-207ENST00000596014 TNFRSF8P28908 595 aa19.02■□□□□ 0.64
PNKP-207ENST00000596014 PPARGP37231 505 aaPredicted RBP19.02■□□□□ 0.64
PNKP-207ENST00000596014 ACTR1BP42025 376 aa19.02■□□□□ 0.64
PNKP-207ENST00000596014 TTPAP49638 278 aa19.02■□□□□ 0.64
PNKP-207ENST00000596014 ACTR1AP61163 376 aa19.02■□□□□ 0.64
PNKP-207ENST00000596014 FASTKD3Q14CZ7 662 aaKnown RBP19.02■□□□□ 0.64
PNKP-207ENST00000596014 PLA2G4EQ3MJ16 856 aa19.02■□□□□ 0.64
PNKP-207ENST00000596014 SPANXN3Q5MJ09 141 aa19.02■□□□□ 0.64
PNKP-207ENST00000596014 C6orf132Q5T0Z8 1188 aa19.02■□□□□ 0.64
PNKP-207ENST00000596014 MRNIPQ6NTE8 343 aa19.02■□□□□ 0.64
PNKP-207ENST00000596014 NEPROQ6NW34 567 aa19.02■□□□□ 0.64
PNKP-207ENST00000596014 ZCCHC8Q6NZY4 707 aaKnown RBP19.02■□□□□ 0.64
PNKP-207ENST00000596014 HDXQ7Z353 690 aa19.02■□□□□ 0.64
PNKP-207ENST00000596014 BEND7Q8N7W2 519 aaPredicted RBP19.02■□□□□ 0.64
PNKP-207ENST00000596014 FAM181AQ8N9Y4 354 aa19.02■□□□□ 0.64
PNKP-207ENST00000596014 GPR150Q8NGU9 434 aa19.02■□□□□ 0.64
PNKP-207ENST00000596014 CDC6Q99741 560 aa19.02■□□□□ 0.64
PNKP-207ENST00000596014 TIMM29Q9BSF4 260 aa19.02■□□□□ 0.64
PNKP-207ENST00000596014 DPEP2Q9H4A9 486 aa19.02■□□□□ 0.64
PNKP-207ENST00000596014 PLAC1Q9HBJ0 212 aa19.02■□□□□ 0.64
PNKP-207ENST00000596014 KLC4Q9NSK0 619 aa19.02■□□□□ 0.64
PNKP-207ENST00000596014 C20orf96Q9NUD7 363 aaPredicted RBP19.02■□□□□ 0.64
PNKP-207ENST00000596014 SPATS2LQ9NUQ6 558 aaKnown RBP19.02■□□□□ 0.64
PNKP-207ENST00000596014 TAAR2Q9P1P5 351 aa19.02■□□□□ 0.64
PNKP-207ENST00000596014 KCNK6Q9Y257 313 aa19.02■□□□□ 0.64
PNKP-207ENST00000596014 DNMT3AQ9Y6K1 912 aaPredicted RBP19.02■□□□□ 0.64
PNKP-207ENST00000596014 DCDC2BA2VCK2 349 aa19.01■□□□□ 0.63
PNKP-207ENST00000596014 MAP2K7O14733 419 aa19.01■□□□□ 0.63
PNKP-207ENST00000596014 EIF3HO15372 352 aaKnown RBP eCLIP19.01■□□□□ 0.63
PNKP-207ENST00000596014 OR1I1O60431 355 aa19.01■□□□□ 0.63
PNKP-207ENST00000596014 POP7O75817 140 aaKnown RBP19.01■□□□□ 0.63
PNKP-207ENST00000596014 LDOC1O95751 146 aaPredicted RBP19.01■□□□□ 0.63
PNKP-207ENST00000596014 INSCQ1MX18 579 aa19.01■□□□□ 0.63
PNKP-207ENST00000596014 BCL7AQ4VC05 210 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms