RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 CCT8L2Q96SF2 557 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 FAM129BQ96TA1 746 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 ACOX2Q99424 681 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 NELL2Q99435 816 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 OLFM1Q99784 485 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 HIST1H2AJQ99878 128 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 EGFL8Q99944 293 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 H2AFJQ9BTM1 129 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 RIOK2Q9BVS4 552 aaKnown RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 DOCK9Q9BZ29 2069 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 DERL2Q9GZP9 239 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 KDM4CQ9H3R0 1056 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 RABEP2Q9H5N1 569 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 TFB2MQ9H5Q4 396 aaKnown RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 ALG9Q9H6U8 611 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 PFDN4Q9NQP4 134 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 ARHGEF3Q9NR81 526 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 PHPT1Q9NRX4 125 aaPredicted RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 THAP1Q9NVV9 213 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 FBXL12Q9NXK8 326 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 CD274Q9NZQ7 290 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 TMEM216Q9P0N5 145 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 THEGQ9P2T0 379 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 SARDHQ9UL12 918 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 CA14Q9ULX7 337 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 MMP17Q9ULZ9 603 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 ITM2BQ9Y287 266 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 FADS3Q9Y5Q0 445 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 OAS3Q9Y6K5 1087 aaKnown RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 EML5Q05BV3 1969 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 TBC1D3DA0A087WVF3 549 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 TBC1D3IA0A087WXS9 549 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 TBC1D3EA0A087X179 549 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 TBC1D3KA0A087X1G2 549 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 TBC1D3FA6NER0 549 aaPredicted RBP6.11□□□□□ -1.43
LIG3-206ENST00000586058 PRR23AA6NEV1 266 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 ERICH4A6NGS2 130 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 AGAP14A8MT82 685 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 GPR89AB7ZAQ6 455 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 TBC1D3LB9A6J9 549 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 SLCO1B7G3V0H7 640 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 AREL1O15033 823 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 INPP4BO15327 924 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 PLRG1O43660 514 aaKnown RBP6.11□□□□□ -1.43
LIG3-206ENST00000586058 VEGFDO43915 354 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 KDM1AO60341 852 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 OR1I1O60431 355 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 EDF1O60869 148 aaKnown RBP6.11□□□□□ -1.43
LIG3-206ENST00000586058 MMP20O60882 483 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 KERAO60938 352 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 CRCPO75575 148 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 IPO13O94829 963 aaKnown RBP6.11□□□□□ -1.43
LIG3-206ENST00000586058 CHEK2O96017 543 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 RPN2P04844 631 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 C8GP07360 202 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 F7P08709 466 aaPredicted RBP6.11□□□□□ -1.43
LIG3-206ENST00000586058 ENO2P09104 434 aaPredicted RBP6.11□□□□□ -1.43
LIG3-206ENST00000586058 TBC1D3HP0C7X1 549 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 GPR89BP0CG08 455 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 PRSS56P0CW18 603 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 IL9P15248 144 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 EZRP15311 586 aaKnown RBP6.11□□□□□ -1.43
LIG3-206ENST00000586058 CD1DP15813 335 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 UGT1A6P19224 532 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 UGT1A1P22309 533 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 UGT1A4P22310 534 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 KELP23276 732 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 UGT1A3P35503 534 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 UGT1A5P35504 534 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 SLC1A6P48664 564 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 CDKN1CP49918 316 aaPredicted RBP6.11□□□□□ -1.43
LIG3-206ENST00000586058 SEC24CP53992 1094 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 CDKN2DP55273 166 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 RPS14P62263 151 aaKnown RBP6.11□□□□□ -1.43
LIG3-206ENST00000586058 PLOD1Q02809 727 aaPredicted RBP6.11□□□□□ -1.43
LIG3-206ENST00000586058 DPTQ07507 201 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 MESP2Q0VG99 397 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 SP140Q13342 867 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 RCN2Q14257 317 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 UBXN2BQ14CS0 331 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 CDKN3Q16667 212 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 ZSCAN26Q16670 478 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 ZNF789Q5FWF6 425 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 CTSL3PQ5NE16 218 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 PLEKHS1Q5SXH7 462 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 PIP5KL1Q5T9C9 394 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 AGBL4Q5VU57 503 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 NAIF1Q69YI7 327 aaPredicted RBP6.11□□□□□ -1.43
LIG3-206ENST00000586058 TBC1D3GQ6DHY5 549 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 TBC1D3CQ6IPX1 549 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 C16orf46Q6P387 395 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 NEK5Q6P3R8 708 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 TTC23LQ6PF05 361 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 CDHR3Q6ZTQ4 885 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 SH2D5Q6ZV89 423 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 DET1Q7L5Y6 550 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 TRAPPC5Q8IUR0 188 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 PIANPQ8IYJ0 282 aa6.11□□□□□ -1.43
LIG3-206ENST00000586058 CPNE9Q8IYJ1 553 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms