RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-210	ENST00000578733	LRP8	Q14114	963 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	NAA30	Q147X3	362 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	ST3GAL2	Q16842	350 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	TEDDM1	Q5T9Z0	273 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	PTRHD1	Q6GMV3	140 aa	Known RBP	11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	TRMT10B	Q6PF06	316 aa	Known RBP	11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	TMEM220	Q6QAJ8	160 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	MARK2	Q7KZI7	788 aa	Known RBP	11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	STRA8	Q7Z7C7	330 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	ADGRG6	Q86SQ4	1221 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	TRIM74	Q86UV6	250 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	HID1	Q8IV36	788 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	DENND6A	Q8IWF6	608 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	PIANP	Q8IYJ0	282 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	PHACTR4	Q8IZ21	702 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	DCLK2	Q8N568	766 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	PPM1N	Q8N819	430 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	PPCS	Q9HAB8	311 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	ARFGAP3	Q9NP61	516 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	FBXO6	Q9NRD1	293 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	DNAJC28	Q9NX36	388 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	MARCH4	Q9P2E8	410 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	ZNHIT2	Q9UHR6	403 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	CDV3	Q9UKY7	258 aa	Known RBP	11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	SUFU	Q9UMX1	484 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	TMEM98	Q9Y2Y6	226 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	GPSM3	Q9Y4H4	160 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	OAS3	Q9Y6K5	1087 aa	Known RBP	11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	DGKB	Q9Y6T7	804 aa		11.13	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	ZFHX4	Q86UP3	3567 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	ARHGAP33	O14559	1287 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	KPNA5	O15131	536 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	MTX2	O75431	263 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	CSF2	P04141	144 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	CEACAM5	P06731	702 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	ZNF806	P0C7X5	589 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	ZNF8	P17098	575 aa	Predicted RBP	11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	JUND	P17535	347 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	SPR	P35270	261 aa	Predicted RBP	11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	GP5	P40197	560 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	HK3	P52790	923 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	IFFO1	Q0D2I5	559 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	ILF3	Q12906	894 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	FZD2	Q14332	565 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	SEMA3A	Q14563	771 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	TMED2	Q15363	201 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	ELOC	Q15369	112 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	SMAD1	Q15797	465 aa	Known RBP	11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	INSC	Q1MX18	579 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	KIF19	Q2TAC6	998 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	KBTBD12	Q3ZCT8	623 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	BCL7A	Q4VC05	210 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	PLA2G2C	Q5R387	149 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	GRTP1	Q5TC63	336 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	LGSN	Q5TDP6	509 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	UGT3A1	Q6NUS8	523 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	DET1	Q7L5Y6	550 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	RD3	Q7Z3Z2	195 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	LDB1	Q86U70	411 aa	Predicted RBP	11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	UNC5B	Q8IZJ1	945 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	SDR16C5	Q8N3Y7	309 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	FSTL5	Q8N475	847 aa	Predicted RBP	11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	MREG	Q8N565	214 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	PDXP	Q96GD0	296 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	SCARF2	Q96GP6	870 aa	Predicted RBP	11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	OR2M4	Q96R27	311 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	ELF4	Q99607	663 aa	Predicted RBP	11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	TIMM29	Q9BSF4	260 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	GSDMC	Q9BYG8	508 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	PLAC1	Q9HBJ0	212 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	CAPN10	Q9HC96	672 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	FGF22	Q9HCT0	170 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	TRNAU1AP	Q9NX07	287 aa	Known RBP	11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	SPAST	Q9UBP0	616 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	FETUB	Q9UGM5	382 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	APOBEC3B	Q9UH17	382 aa	Known RBP	11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	TMPRSS11E	Q9UL52	423 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	DOLK	Q9UPQ8	538 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	SNX11	Q9Y5W9	270 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	SLCO1B1	Q9Y6L6	691 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	CABIN1	Q9Y6J0	2220 aa		11.12	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	NEMP2	A6NFY4	417 aa		11.11	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	OR2AG2	A6NM03	316 aa		11.11	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	CHUK	O15111	745 aa		11.11	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	DNAJC6	O75061	913 aa		11.11	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	VPS26A	O75436	327 aa		11.11	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	KRT38	O76015	456 aa		11.11	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	S1PR4	O95977	384 aa		11.11	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	PKM	P14618	531 aa	Known RBP	11.11	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	NME1	P15531	152 aa	Known RBP	11.11	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	FMO4	P31512	558 aa		11.11	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	MSH2	P43246	934 aa		11.11	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	POLD2	P49005	469 aa		11.11	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	PRLHR	P49683	370 aa		11.11	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	SERPINB9	P50453	376 aa		11.11	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	CCT8	P50990	548 aa		11.11	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	SLC12A2	P55011	1212 aa		11.11	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	MPP1	Q00013	466 aa		11.11	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	PLOD1	Q02809	727 aa	Predicted RBP	11.11	□□□□□ -0.63
CDK5RAP3-210	ENST00000578733	EIF2B5	Q13144	721 aa	Known RBP	11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms