RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 ISXQ2M1V0 245 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 BCL7AQ4VC05 210 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 ZRANB3Q5FWF4 1079 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 WASH2PQ6VEQ5 465 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 RBM44Q6ZP01 1051 aaKnown RBP19.01■□□□□ 0.63
SS18-208ENST00000577751 AMZ2Q86W34 360 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 SERPINA9Q86WD7 417 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 PIANPQ8IYJ0 282 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 PPHLN1Q8NEY8 458 aaKnown RBP19.01■□□□□ 0.63
SS18-208ENST00000577751 CCDC97Q96F63 343 aaPredicted RBP19.01■□□□□ 0.63
SS18-208ENST00000577751 SGSM3Q96HU1 749 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 CAPZA3Q96KX2 299 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 LINC00615Q96LM1 132 aaPredicted RBP19.01■□□□□ 0.63
SS18-208ENST00000577751 COPS8Q99627 209 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 NRSN2Q9GZP1 204 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 SARS2Q9NP81 518 aaKnown RBP19.01■□□□□ 0.63
SS18-208ENST00000577751 WASH6PQ9NQA3 447 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 CHRAC1Q9NRG0 131 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 BFARQ9NZS9 450 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 RNF14Q9UBS8 474 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 DNAJC16Q9Y2G8 782 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 UNC13CQ8NB66 2214 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 RHPN2P1A8MT19 583 aa19■□□□□ 0.63
SS18-208ENST00000577751 CSO75390 466 aaKnown RBP19■□□□□ 0.63
SS18-208ENST00000577751 PROS1P07225 676 aa19■□□□□ 0.63
SS18-208ENST00000577751 RALBP11234 206 aa19■□□□□ 0.63
SS18-208ENST00000577751 BRAFP15056 766 aa19■□□□□ 0.63
SS18-208ENST00000577751 VCLP18206 1134 aa19■□□□□ 0.63
SS18-208ENST00000577751 PDX1P52945 283 aa19■□□□□ 0.63
SS18-208ENST00000577751 SARNPP82979 210 aaKnown RBP19■□□□□ 0.63
SS18-208ENST00000577751 SPIDRQ14159 915 aa19■□□□□ 0.63
SS18-208ENST00000577751 FNBP1LQ5T0N5 605 aa19■□□□□ 0.63
SS18-208ENST00000577751 AGAP9Q5VTM2 703 aa19■□□□□ 0.63
SS18-208ENST00000577751 ANKRD22Q5VYY1 191 aa19■□□□□ 0.63
SS18-208ENST00000577751 DET1Q7L5Y6 550 aa19■□□□□ 0.63
SS18-208ENST00000577751 Q8N9G6 341 aaPredicted RBP19■□□□□ 0.63
SS18-208ENST00000577751 MCUQ8NE86 351 aa19■□□□□ 0.63
SS18-208ENST00000577751 HDAC10Q969S8 669 aa19■□□□□ 0.63
SS18-208ENST00000577751 GRAMD1AQ96CP6 724 aa19■□□□□ 0.63
SS18-208ENST00000577751 DCUN1D1Q96GG9 259 aa19■□□□□ 0.63
SS18-208ENST00000577751 OSGEPL1Q9H4B0 414 aa19■□□□□ 0.63
SS18-208ENST00000577751 SCHIP1Q9P0W5 487 aaPredicted RBP19■□□□□ 0.63
SS18-208ENST00000577751 ENTPD2Q9Y5L3 495 aa19■□□□□ 0.63
SS18-208ENST00000577751 KLHL33A6NCF5 533 aa18.99■□□□□ 0.63
SS18-208ENST00000577751 OR51F1A6NGY5 319 aa18.99■□□□□ 0.63
SS18-208ENST00000577751 TMEM63AO94886 807 aa18.99■□□□□ 0.63
SS18-208ENST00000577751 ATP1B2P14415 290 aaPredicted RBP18.99■□□□□ 0.63
SS18-208ENST00000577751 XRCC1P18887 633 aaPredicted RBP18.99■□□□□ 0.63
SS18-208ENST00000577751 IDSP22304 550 aa18.99■□□□□ 0.63
SS18-208ENST00000577751 PTGIRP43119 386 aa18.99■□□□□ 0.63
SS18-208ENST00000577751 PRLHRP49683 370 aa18.99■□□□□ 0.63
SS18-208ENST00000577751 OR1D5P58170 312 aa18.99■□□□□ 0.63
SS18-208ENST00000577751 ETF1P62495 437 aaKnown RBP18.99■□□□□ 0.63
SS18-208ENST00000577751 UBE2IP63279 158 aaKnown RBP18.99■□□□□ 0.63
SS18-208ENST00000577751 CRADDP78560 199 aa18.99■□□□□ 0.63
SS18-208ENST00000577751 RTP5Q14D33 572 aa18.99■□□□□ 0.63
SS18-208ENST00000577751 XKR5Q6UX68 686 aa18.99■□□□□ 0.63
SS18-208ENST00000577751 CAND1Q86VP6 1230 aaKnown RBP18.99■□□□□ 0.63
SS18-208ENST00000577751 BEND7Q8N7W2 519 aaPredicted RBP18.99■□□□□ 0.63
SS18-208ENST00000577751 NAT8LQ8N9F0 302 aa18.99■□□□□ 0.63
SS18-208ENST00000577751 KDF1Q8NAX2 398 aaPredicted RBP18.99■□□□□ 0.63
SS18-208ENST00000577751 GFM1Q96RP9 751 aaKnown RBP18.99■□□□□ 0.63
SS18-208ENST00000577751 KIFC1Q9BW19 673 aa18.99■□□□□ 0.63
SS18-208ENST00000577751 MRM3Q9HC36 420 aaKnown RBP18.99■□□□□ 0.63
SS18-208ENST00000577751 TREX1Q9NSU2 369 aa18.99■□□□□ 0.63
SS18-208ENST00000577751 ZNF624Q9P2J8 865 aaPredicted RBP18.99■□□□□ 0.63
SS18-208ENST00000577751 CPNE7Q9UBL6 633 aa18.99■□□□□ 0.63
SS18-208ENST00000577751 DKK4Q9UBT3 224 aa18.99■□□□□ 0.63
SS18-208ENST00000577751 PCDHB1Q9Y5F3 818 aa18.99■□□□□ 0.63
SS18-208ENST00000577751 CHD8Q9HCK8 2581 aa18.99■□□□□ 0.63
SS18-208ENST00000577751 TMEM8BA6NDV4 472 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 MGAT4DA6NG13 374 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 D6RAR5 112 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 CFAP99D6REC4 459 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 ZW10O43264 779 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 GOT2P00505 430 aaKnown RBP18.98■□□□□ 0.63
SS18-208ENST00000577751 MLNP12872 115 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 MGAT1P26572 445 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 ALDH4A1P30038 563 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 TERF1P54274 439 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 HHEXQ03014 270 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 BIRC2Q13490 618 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 SQSTM1Q13501 440 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 ITIH4Q14624 930 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 DBN1Q16643 649 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 CLPPQ16740 277 aaPredicted RBP18.98■□□□□ 0.63
SS18-208ENST00000577751 ARMC3Q5W041 872 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 METRNLQ641Q3 311 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 AFTPHQ6ULP2 937 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 FAM83HQ6ZRV2 1179 aaPredicted RBP18.98■□□□□ 0.63
SS18-208ENST00000577751 TAS2R42Q7RTR8 314 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 SLC9B2Q86UD5 537 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 AVL9Q8NBF6 648 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 OR2L2Q8NH16 312 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 OR4L1Q8NH43 312 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 NAT14Q8WUY8 206 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 SYBUQ9NX95 663 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 WDR37Q9Y2I8 494 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 ACACBO00763 2458 aa18.98■□□□□ 0.63
SS18-208ENST00000577751 FRYQ5TBA9 3013 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms