RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 GPLD1P80108 840 aa13.74□□□□□ -0.21
GGA3-203ENST00000577435 HHEXQ03014 270 aa13.74□□□□□ -0.21
GGA3-203ENST00000577435 POU6F1Q14863 301 aa13.74□□□□□ -0.21
GGA3-203ENST00000577435 SKIDA1Q1XH10 827 aa13.74□□□□□ -0.21
GGA3-203ENST00000577435 TBC1D25Q3MII6 688 aa13.74□□□□□ -0.21
GGA3-203ENST00000577435 TMPRSS9Q7Z410 1059 aa13.74□□□□□ -0.21
GGA3-203ENST00000577435 PRUNE1Q86TP1 453 aa13.74□□□□□ -0.21
GGA3-203ENST00000577435 AMZ2Q86W34 360 aa13.74□□□□□ -0.21
GGA3-203ENST00000577435 NXPE1Q8N323 547 aa13.74□□□□□ -0.21
GGA3-203ENST00000577435 SLC35F6Q8N357 371 aa13.74□□□□□ -0.21
GGA3-203ENST00000577435 TAB3Q8N5C8 712 aaPredicted RBP13.74□□□□□ -0.21
GGA3-203ENST00000577435 SNIP1Q8TAD8 396 aaKnown RBP13.74□□□□□ -0.21
GGA3-203ENST00000577435 TMEM159Q96B96 161 aa13.74□□□□□ -0.21
GGA3-203ENST00000577435 DNAJC1Q96KC8 554 aaKnown RBP13.74□□□□□ -0.21
GGA3-203ENST00000577435 LINC00615Q96LM1 132 aaPredicted RBP13.74□□□□□ -0.21
GGA3-203ENST00000577435 NAP1L3Q99457 506 aaPredicted RBP13.74□□□□□ -0.21
GGA3-203ENST00000577435 SLC38A3Q99624 504 aa13.74□□□□□ -0.21
GGA3-203ENST00000577435 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.74□□□□□ -0.21
GGA3-203ENST00000577435 STN1Q9H668 368 aaKnown RBP13.74□□□□□ -0.21
GGA3-203ENST00000577435 SYNDIG1Q9H7V2 258 aa13.74□□□□□ -0.21
GGA3-203ENST00000577435 UCK1Q9HA47 277 aa13.74□□□□□ -0.21
GGA3-203ENST00000577435 ASCL3Q9NQ33 180 aa13.74□□□□□ -0.21
GGA3-203ENST00000577435 SCHIP1Q9P0W5 487 aaPredicted RBP13.74□□□□□ -0.21
GGA3-203ENST00000577435 CPNE7Q9UBL6 633 aa13.74□□□□□ -0.21
GGA3-203ENST00000577435 SATB2Q9UPW6 733 aa13.74□□□□□ -0.21
GGA3-203ENST00000577435 RAXQ9Y2V3 346 aa13.74□□□□□ -0.21
GGA3-203ENST00000577435 SLC30A1Q9Y6M5 507 aa13.74□□□□□ -0.21
GGA3-203ENST00000577435 PTPRQQ9UMZ3 2332 aa13.74□□□□□ -0.21
GGA3-203ENST00000577435 IGLV3-16A0A075B6K0 115 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 A0A087WV48 116 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 HEATR9A2RTY3 570 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 CES2O00748 559 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 TLX3O43711 291 aaPredicted RBP13.73□□□□□ -0.21
GGA3-203ENST00000577435 KIF5CO60282 957 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 APRTP07741 180 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 ADRA1DP25100 572 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 MC4RP32245 332 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 SLC19A1P41440 591 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 GRIA1P42261 906 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 LMAN1P49257 510 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 EPHA4P54764 986 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 TMPRSS15P98073 1019 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 CYP1B1Q16678 543 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 AMZ1Q400G9 498 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 BCL7AQ4VC05 210 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 METRNLQ641Q3 311 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 PPP1R21Q6ZMI0 780 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 ZNF574Q6ZN55 896 aaPredicted RBP13.73□□□□□ -0.21
GGA3-203ENST00000577435 USP53Q70EK8 1073 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 RAB11FIP2Q7L804 512 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 DNAAF3Q8N9W5 541 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 ACTRT1Q8TDG2 376 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 PEX13Q92968 403 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 SGF29Q96ES7 293 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 OSGEPL1Q9H4B0 414 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 EPB41L1Q9H4G0 881 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 PIH1D1Q9NWS0 290 aaKnown RBP13.73□□□□□ -0.21
GGA3-203ENST00000577435 TRMT1Q9NXH9 659 aaKnown RBP13.73□□□□□ -0.21
GGA3-203ENST00000577435 KCNK4Q9NYG8 393 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 ZNF624Q9P2J8 865 aaPredicted RBP13.73□□□□□ -0.21
GGA3-203ENST00000577435 PDP2Q9P2J9 529 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 CRLS1Q9UJA2 301 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 DNAJC16Q9Y2G8 782 aa13.73□□□□□ -0.21
GGA3-203ENST00000577435 FAM208BQ5VWN6 2430 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.72□□□□□ -0.21
GGA3-203ENST00000577435 MGAT4DA6NG13 374 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 LILRA5A6NI73 299 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 OR2AG2A6NM03 316 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 CDRT15L2A8MXV6 281 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 AP3B1O00203 1094 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 PLD2O14939 933 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 SGTAO43765 313 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 RALBP11234 206 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 BRAFP15056 766 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 RBMS1P29558 406 aaKnown RBP13.72□□□□□ -0.21
GGA3-203ENST00000577435 AKT1P31749 480 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 EIF2S3P41091 472 aaKnown RBP13.72□□□□□ -0.21
GGA3-203ENST00000577435 LIMK2P53671 638 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 CDK16Q00536 496 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 CFHR1Q03591 330 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 ACVR1Q04771 509 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 CACNG1Q06432 222 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 TRA2AQ13595 282 aaKnown RBP eCLIP13.72□□□□□ -0.213e-7■■■■□ 23.2
GGA3-203ENST00000577435 PLA2G4EQ3MJ16 856 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 C3orf38Q5JPI3 329 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 TMEM71Q6P5X7 295 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 NLRP9Q7RTR0 991 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 GSTA5Q7RTV2 222 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 RBM12BQ8IXT5 1001 aaKnown RBP13.72□□□□□ -0.21
GGA3-203ENST00000577435 FBXO39Q8N4B4 442 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 OR4D9Q8NGE8 314 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 OR10G6Q8NH81 332 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 DCUN1D1Q96GG9 259 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 SGSM3Q96HU1 749 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 MS4A14Q96JA4 679 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 OSBPL9Q96SU4 736 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 COPS8Q99627 209 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 NUDT22Q9BRQ3 303 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 FOXP3Q9BZS1 431 aa13.72□□□□□ -0.21
GGA3-203ENST00000577435 RDH14Q9HBH5 336 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms