RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 ETV5P41161 510 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 SLC19A1P41440 591 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 RPIAP49247 311 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 OR1D5P58170 312 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 CDH17Q12864 832 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 ITGA9Q13797 1035 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 NFE2L1Q14494 772 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 CLCA4Q14CN2 919 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 TPSAB1Q15661 275 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 LDLRAP1Q5SW96 308 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 PAPD7Q5XG87 772 aaKnown RBP8.53□□□□□ -1.04
SMG6-216ENST00000575176 ABRAXAS1Q6UWZ7 409 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 WASH2PQ6VEQ5 465 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 CLEC14AQ86T13 490 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 CAND1Q86VP6 1230 aaKnown RBP8.53□□□□□ -1.04
SMG6-216ENST00000575176 CREG2Q8IUH2 290 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 C17orf53Q8N3J3 647 aaPredicted RBP8.53□□□□□ -1.04
SMG6-216ENST00000575176 BMPERQ8N8U9 685 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 OR6C4Q8NGE1 309 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 ZNF398Q8TD17 642 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 CPT1BQ92523 772 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 CDKN2AIPNLQ96HQ2 116 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 SGSM3Q96HU1 749 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 RMDN2Q96LZ7 410 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 DEPDC7Q96QD5 511 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 WDR83Q9BRX9 315 aaKnown RBP8.53□□□□□ -1.04
SMG6-216ENST00000575176 AP1M1Q9BXS5 423 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 FOXP3Q9BZS1 431 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 SEMA6CQ9H3T2 930 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 PLAC1Q9HBJ0 212 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 WASH6PQ9NQA3 447 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 RAB6BQ9NRW1 208 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 KLC4Q9NSK0 619 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 PAK5Q9P286 719 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 MARCH4Q9P2E8 410 aaPredicted RBP8.53□□□□□ -1.04
SMG6-216ENST00000575176 ZNHIT2Q9UHR6 403 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 SATB2Q9UPW6 733 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 ZNF148Q9UQR1 794 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 RAXQ9Y2V3 346 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 PKP3Q9Y446 797 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 TCAF1Q9Y4C2 921 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 PRSS21Q9Y6M0 314 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.53□□□□□ -1.04
SMG6-216ENST00000575176 SLC30A1Q9Y6M5 507 aa8.53□□□□□ -1.04
SMG6-216ENST00000575176 A0A087WV48 116 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 IGHV5-10-1A0A0J9YXX1 117 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 CCDC78A2IDD5 438 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 LILRA5A6NI73 299 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 OR2AG2A6NM03 316 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 OR52A4PA6NMU1 304 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 C2orf81A6NN90 581 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 PGRMC1O00264 195 aaKnown RBP8.52□□□□□ -1.05
SMG6-216ENST00000575176 KMOO15229 486 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 PHF2O75151 1096 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 CDK14O94921 469 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 CRTAMO95727 393 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 JUPP14923 745 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 COILP38432 576 aaPredicted RBP8.52□□□□□ -1.05
SMG6-216ENST00000575176 PTGIRP43119 386 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 GPR3P46089 330 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 LSSP48449 732 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 PPP1CAP62136 330 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 CRADDP78560 199 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 TMPRSS15P98073 1019 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 SPIDRQ14159 915 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 PRPSAP1Q14558 356 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 LONRF2Q1L5Z9 754 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 TBC1D25Q3MII6 688 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 HS1BP3Q53T59 392 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 TSTD2Q5T7W7 516 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 NKAIN2Q5VXU1 208 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 DUS1LQ6P1R4 473 aaKnown RBP8.52□□□□□ -1.05
SMG6-216ENST00000575176 PACS1Q6VY07 963 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 SNX20Q7Z614 316 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 SERPINA9Q86WD7 417 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 MPP5Q8N3R9 675 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 WDR48Q8TAF3 677 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 LKAAEAR1Q8TD35 194 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 STYXQ8WUJ0 223 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 SCG3Q8WXD2 468 aaKnown RBP8.52□□□□□ -1.05
SMG6-216ENST00000575176 SLCO2A1Q92959 643 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 GLMNQ92990 594 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 SGF29Q96ES7 293 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 CRELD1Q96HD1 420 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 PBKQ96KB5 322 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 NRTNQ99748 197 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 FAM96AQ9H5X1 160 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 CCDC86Q9H6F5 360 aaKnown RBP8.52□□□□□ -1.05
SMG6-216ENST00000575176 ASB8Q9H765 288 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 POLR1BQ9H9Y6 1135 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 UCK1Q9HA47 277 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 RDH14Q9HBH5 336 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 SYBUQ9NX95 663 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 SIDT1Q9NXL6 827 aaKnown RBP8.52□□□□□ -1.05
SMG6-216ENST00000575176 CPNE7Q9UBL6 633 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 DOLKQ9UPQ8 538 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 PCDHGA8Q9Y5G5 932 aa8.52□□□□□ -1.05
SMG6-216ENST00000575176 PCSK5Q92824 1860 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 KIR2DS5A0A0G2JLQ3 304 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 A0A0G2JNG1 304 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms