RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 SGF29Q96ES7 293 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ZNF514Q96K75 400 aaPredicted RBP16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 SPATA13Q96N96 652 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 BAG1Q99933 345 aaPredicted RBP16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 SPRY4Q9C004 299 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 OSGEPL1Q9H4B0 414 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ARNT2Q9HBZ2 717 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 SCHIP1Q9P0W5 487 aaPredicted RBP16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ZNF624Q9P2J8 865 aaPredicted RBP16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 IMPACTQ9P2X3 320 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 FEZ2Q9UHY8 353 aaPredicted RBP16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 HELZ2Q9BYK8 2649 aaKnown RBP16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 C5orf60A6NFR6 353 aa16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 MIF4GDA9UHW6 222 aaKnown RBP16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 MTX2O75431 263 aa16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 STK10O94804 968 aaKnown RBP16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 CDC25BP30305 580 aa16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 EIF3EP60228 445 aaKnown RBP16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 PDE1BQ01064 536 aa16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 CHRNA6Q15825 494 aa16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 TAF1BQ53T94 588 aaPredicted RBP16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 MANEAQ5SRI9 462 aa16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 DCAF12Q5T6F0 453 aa16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 CCDC181Q5TID7 509 aa16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 SYCE1Q8N0S2 351 aa16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ZNF843Q8N446 348 aa16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ACRBPQ8NEB7 543 aa16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ART4Q93070 314 aa16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 RAB33BQ9H082 229 aa16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 SLC40A1Q9NP59 571 aa16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 OCIAD1Q9NX40 245 aa16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 SLC39A1Q9NY26 324 aa16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 OGFRQ9NZT2 677 aa16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 EPHA6Q9UF33 1036 aa16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 B3GALT1Q9Y5Z6 326 aa16.8■□□□□ 0.28
MAP1LC3B-208ENST00000570189 C2orf81A6NN90 581 aa16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 AGTP01019 485 aa16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 VIPP01282 170 aa16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 PRB1P04280 392 aa16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 PYGMP11217 842 aa16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 LPOP22079 712 aaPredicted RBP16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ATP1A2P50993 1020 aa16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 KLF1Q13351 362 aaPredicted RBP16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 PRPSAP1Q14558 356 aa16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 GPRC6AQ5T6X5 926 aa16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 GAS2L3Q86XJ1 694 aa16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 TRAPPC5Q8IUR0 188 aa16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 TTC13Q8NBP0 860 aa16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 NCSTNQ92542 709 aa16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 NKD1Q969G9 470 aa16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 PMEPA1Q969W9 287 aa16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 TTC25Q96NG3 672 aa16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 TBC1D10AQ9BXI6 508 aa16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 SIDT1Q9NXL6 827 aaKnown RBP16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 AMFRQ9UKV5 643 aa16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 PCDHGA4Q9Y5G9 962 aa16.79■□□□□ 0.28
MAP1LC3B-208ENST00000570189 PIKFYVEQ9Y2I7 2098 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 EFCAB7A8K855 629 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 STX7O15400 261 aaKnown RBP16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 UBXN7O94888 489 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 MPSTP25325 297 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 PSMB4P28070 264 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 UGT1A3P35503 534 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 CAPZBP47756 277 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 NAP1L1P55209 391 aaKnown RBP16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 PLA2G4EQ3MJ16 856 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 KIAA1614Q5VZ46 1190 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 FAM151BQ6UXP7 276 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 CEACAM20Q6UY09 585 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 AMZ2Q86W34 360 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 TRIM48Q8IWZ4 208 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 UBL4BQ8N7F7 174 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 RASGEF1AQ8N9B8 481 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 GDAP1Q8TB36 358 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 RTP4Q96DX8 246 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 MED8Q96G25 268 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 C9orf72Q96LT7 481 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 FICDQ9BVA6 458 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ZMYND15Q9H091 742 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 SEMA5BQ9P283 1151 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 PILRAQ9UKJ1 303 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 TMEM184BQ9Y519 407 aaPredicted RBP16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 PIEZO2Q9H5I5 2752 aa16.78■□□□□ 0.28
MAP1LC3B-208ENST00000570189 PDZK1P1A8MUH7 402 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 KCNN4O15554 427 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 UGT1A9O60656 530 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 PRAMEF1O95521 474 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 CRTAMO95727 393 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 UGT1A6P19224 532 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 UGT1A1P22309 533 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 UGT1A4P22310 534 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 CTSCP53634 463 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 XIAPP98170 497 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 KIF5AQ12840 1032 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 MAP7Q14244 749 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 KCTD11Q693B1 232 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 DENND5AQ6IQ26 1287 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 DARS2Q6PI48 645 aaKnown RBP16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 PEX26Q7Z412 305 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 PRSS42Q7Z5A4 293 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms